Protein : Qrob_P0533030.2 Q. robur
Protein Identifier  ? Qrob_P0533030.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) K01885 - glutamyl-tRNA synthetase [EC:6.1.1.17] Code Enzyme  EC:6.1.1.17
Gene Prediction Quality  validated Protein length 

Sequence

Length: 179  
Kegg Orthology  K01885
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0016876 ligase activity, forming aminoacyl-tRNA and related compounds Catalysis of the joining of an amino acid and a nucleic acid (usually tRNA) or poly(ribitol phosphate), with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate. The reaction forms an aminoacyl-tRNA or a related compound.
GO:0043039 tRNA aminoacylation The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0009s17070g 1 172 + 172 Gaps:5 29.09 574 72.46 1e-71 POPTRDRAFT_803960 hypothetical protein
blastp_kegg lcl|cit:102612397 24 172 + 149 Gaps:8 25.04 571 77.62 3e-68 glutamate--tRNA ligase chloroplastic/mitochondrial-like
blastp_kegg lcl|cic:CICLE_v10028098mg 24 172 + 149 Gaps:8 25.04 571 77.62 3e-68 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0281090 5 172 + 168 Gaps:12 29.12 577 70.24 9e-67 glutamyl-tRNA synthetase 1 2 putative (EC:6.1.1.17)
blastp_kegg lcl|pmum:103336440 35 172 + 138 Gaps:9 22.55 572 86.05 2e-66 glutamate--tRNA ligase chloroplastic/mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa003473mg 35 172 + 138 Gaps:9 22.55 572 84.50 6e-66 hypothetical protein
blastp_kegg lcl|ath:AT5G64050 5 172 + 168 Gaps:16 28.07 570 71.25 1e-64 ERS glutamyl-tRNA synthetase
blastp_kegg lcl|vvi:100250310 5 172 + 168 Gaps:11 27.74 566 72.61 2e-64 glutamyl-tRNA synthetase chloroplastic/mitochondrial-like
blastp_kegg lcl|pda:103705215 5 172 + 168 Gaps:7 28.30 569 69.57 3e-64 glutamate--tRNA ligase chloroplastic/mitochondrial
blastp_kegg lcl|aly:ARALYDRAFT_496600 5 172 + 168 Gaps:16 28.07 570 70.62 4e-64 ATERS/ERS/OVA3
blastp_pdb 2o5r_A 63 174 + 112 none 23.28 481 64.29 3e-45 mol:protein length:481 Glutamyl-tRNA synthetase 1
blastp_pdb 3al0_C 62 165 + 104 none 17.57 592 64.42 4e-44 mol:protein length:592 Glutamyl-tRNA(Gln) amidotransferase subunit C
blastp_pdb 3akz_A 62 172 + 111 none 22.79 487 61.26 4e-43 mol:protein length:487 Glutamyl-tRNA synthetase 2
blastp_pdb 3akz_C 62 172 + 111 none 22.79 487 61.26 4e-43 mol:protein length:487 Glutamyl-tRNA synthetase 2
blastp_pdb 3akz_D 62 172 + 111 none 22.79 487 61.26 4e-43 mol:protein length:487 Glutamyl-tRNA synthetase 2
blastp_pdb 3akz_B 62 172 + 111 none 22.79 487 61.26 4e-43 mol:protein length:487 Glutamyl-tRNA synthetase 2
blastp_pdb 3afh_A 62 172 + 111 none 22.75 488 61.26 4e-43 mol:protein length:488 Glutamyl-tRNA synthetase 2
blastp_pdb 2cfo_B 64 172 + 109 Gaps:8 20.53 492 61.39 1e-35 mol:protein length:492 GLUTAMYL-TRNA SYNTHETASE
blastp_pdb 2cfo_A 64 172 + 109 Gaps:8 20.53 492 61.39 1e-35 mol:protein length:492 GLUTAMYL-TRNA SYNTHETASE
blastp_pdb 3pnv_B 62 174 + 113 none 22.38 505 54.87 1e-34 mol:protein length:505 Glutamyl-tRNA synthetase
blastp_uniprot_sprot sp|Q9FEA2|SYE_ARATH 5 172 + 168 Gaps:16 28.07 570 71.25 4e-66 Glutamate--tRNA ligase chloroplastic/mitochondrial OS Arabidopsis thaliana GN At5g64050 PE 1 SV 1
blastp_uniprot_sprot sp|Q43794|SYE_TOBAC 14 172 + 159 Gaps:6 26.89 569 67.32 1e-63 Glutamate--tRNA ligase chloroplastic/mitochondrial OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|Q43768|SYE_HORVU 64 172 + 109 none 19.46 560 81.65 3e-60 Glutamate--tRNA ligase chloroplastic/mitochondrial OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|A7HL47|SYE2_FERNB 54 165 + 112 none 23.98 467 66.07 1e-46 Glutamate--tRNA ligase 2 OS Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN gltX2 PE 3 SV 1
blastp_uniprot_sprot sp|A9BGT8|SYE2_PETMO 64 174 + 111 none 22.75 488 63.96 1e-45 Glutamate--tRNA ligase 2 OS Petrotoga mobilis (strain DSM 10674 / SJ95) GN gltX2 PE 3 SV 1
blastp_uniprot_sprot sp|A4XLI3|SYE2_CALS8 63 174 + 112 none 23.24 482 60.71 7e-45 Glutamate--tRNA ligase 2 OS Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN gltX2 PE 3 SV 1
blastp_uniprot_sprot sp|A5IMM2|SYE2_THEP1 63 174 + 112 none 23.88 469 64.29 9e-45 Glutamate--tRNA ligase 2 OS Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN gltX2 PE 3 SV 1
blastp_uniprot_sprot sp|Q9X172|SYE1_THEMA 63 174 + 112 none 23.88 469 64.29 9e-45 Glutamate--tRNA ligase 1 OS Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN gltX1 PE 1 SV 1
blastp_uniprot_sprot sp|A7HKV0|SYE1_FERNB 64 174 + 111 none 23.67 469 64.86 4e-44 Glutamate--tRNA ligase 1 OS Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN gltX1 PE 3 SV 1
blastp_uniprot_sprot sp|Q67TJ2|SYE_SYMTH 64 172 + 109 none 22.61 482 61.47 4e-44 Glutamate--tRNA ligase OS Symbiobacterium thermophilum (strain T / IAM 14863) GN gltX PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 70 81 12 PS00178 "Reactome:REACT_71" Aminoacyl-transfer RNA synthetases class-I signature. IPR001412
SUPERFAMILY 64 174 111 SSF52374 none none none
Gene3D 62 172 111 G3DSA:3.40.50.620 none none IPR014729
PRINTS 67 79 13 PR00987 "Reactome:REACT_71" Glutamyl-tRNA synthetase signature IPR000924
PRINTS 81 92 12 PR00987 "Reactome:REACT_71" Glutamyl-tRNA synthetase signature IPR000924
PRINTS 96 109 14 PR00987 "Reactome:REACT_71" Glutamyl-tRNA synthetase signature IPR000924
Pfam 64 173 110 PF00749 "Reactome:REACT_71" tRNA synthetases class I (E and Q), catalytic domain IPR020058
PANTHER 64 174 111 PTHR10119 "Reactome:REACT_71";signature_desc=GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE none IPR000924

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting