Protein : Qrob_P0519980.2 Q. robur
Protein Identifier  ? Qrob_P0519980.2 Organism . Name  Quercus robur
Score  76.1 Score Type  egn
Protein Description  (M=1) 2.1.2.3 - Phosphoribosylaminoimidazolecarboxamide formyltransferase. Code Enzyme  EC:2.1.2.3, EC:3.5.4.10
Gene Prediction Quality  validated Protein length 

Sequence

Length: 644  
Kegg Orthology  K00602
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0006164 purine nucleotide biosynthetic process The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
GO:0003937 IMP cyclohydrolase activity Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide.
GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0503930 13 643 + 631 Gaps:47 96.60 617 83.05 0.0 bifunctional purine biosynthesis protein putative (EC:2.1.2.3)
blastp_kegg lcl|tcc:TCM_006021 38 643 + 606 Gaps:40 92.03 615 85.87 0.0 AICARFT/IMPCHase bienzyme family protein isoform 1
blastp_kegg lcl|vvi:100245755 33 643 + 611 Gaps:44 94.21 604 86.12 0.0 bifunctional purine biosynthesis protein PurH-like
blastp_kegg lcl|cit:102621065 38 643 + 606 Gaps:42 94.67 600 85.74 0.0 bifunctional purine biosynthesis protein purH-like
blastp_kegg lcl|cic:CICLE_v10014669mg 38 643 + 606 Gaps:43 94.66 599 85.71 0.0 hypothetical protein
blastp_kegg lcl|pmum:103336648 1 643 + 643 Gaps:43 100.00 606 81.19 0.0 bifunctional purine biosynthesis protein purH
blastp_kegg lcl|gmx:100780260 21 643 + 623 Gaps:47 95.21 605 84.90 0.0 bifunctional purine biosynthesis protein purH-like
blastp_kegg lcl|pxb:103961694 1 643 + 643 Gaps:56 100.00 609 81.61 0.0 bifunctional purine biosynthesis protein purH-like
blastp_kegg lcl|cmo:103484902 32 643 + 612 Gaps:42 94.37 604 84.74 0.0 bifunctional purine biosynthesis protein purH
blastp_kegg lcl|pvu:PHAVU_005G018700g 13 643 + 631 Gaps:41 97.20 607 82.71 0.0 hypothetical protein
blastp_pdb 4a1o_B 84 643 + 560 Gaps:55 98.09 523 46.00 2e-133 mol:protein length:523 BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
blastp_pdb 4a1o_A 84 643 + 560 Gaps:55 98.09 523 46.00 2e-133 mol:protein length:523 BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
blastp_pdb 3zzm_B 84 643 + 560 Gaps:55 98.09 523 46.00 2e-133 mol:protein length:523 BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
blastp_pdb 3zzm_A 84 643 + 560 Gaps:55 98.09 523 46.00 2e-133 mol:protein length:523 BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
blastp_pdb 1zcz_B 84 643 + 560 Gaps:123 97.20 464 43.24 1e-79 mol:protein length:464 Bifunctional purine biosynthesis protein purH
blastp_pdb 1zcz_A 84 643 + 560 Gaps:123 97.20 464 43.24 1e-79 mol:protein length:464 Bifunctional purine biosynthesis protein purH
blastp_pdb 1pl0_D 86 643 + 558 Gaps:120 98.99 592 34.81 4e-65 mol:protein length:592 Bifunctional purine biosynthesis protein PURH
blastp_pdb 1pl0_C 86 643 + 558 Gaps:120 98.99 592 34.81 4e-65 mol:protein length:592 Bifunctional purine biosynthesis protein PURH
blastp_pdb 1pl0_B 86 643 + 558 Gaps:120 98.99 592 34.81 4e-65 mol:protein length:592 Bifunctional purine biosynthesis protein PURH
blastp_pdb 1pl0_A 86 643 + 558 Gaps:120 98.99 592 34.81 4e-65 mol:protein length:592 Bifunctional purine biosynthesis protein PURH
blastp_uniprot_sprot sp|Q8RC55|PUR9_THETN 83 643 + 561 Gaps:56 99.80 508 50.69 2e-158 Bifunctional purine biosynthesis protein PurH OS Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN purH PE 3 SV 1
blastp_uniprot_sprot sp|Q0AW31|PUR9_SYNWW 84 643 + 560 Gaps:57 99.80 506 51.29 4e-158 Bifunctional purine biosynthesis protein PurH OS Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) GN purH PE 3 SV 1
blastp_uniprot_sprot sp|A3DEU9|PUR9_CLOTH 84 643 + 560 Gaps:62 99.61 514 50.39 1e-157 Bifunctional purine biosynthesis protein PurH OS Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN purH PE 3 SV 1
blastp_uniprot_sprot sp|B7GFU2|PUR9_ANOFW 84 643 + 560 Gaps:63 99.61 511 50.88 3e-157 Bifunctional purine biosynthesis protein PurH OS Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN purH PE 3 SV 1
blastp_uniprot_sprot sp|B0KBQ1|PUR9_THEP3 84 643 + 560 Gaps:56 99.61 508 50.20 5e-157 Bifunctional purine biosynthesis protein PurH OS Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN purH PE 3 SV 1
blastp_uniprot_sprot sp|B0K3Q8|PUR9_THEPX 84 643 + 560 Gaps:56 99.61 508 50.20 1e-156 Bifunctional purine biosynthesis protein PurH OS Thermoanaerobacter sp. (strain X514) GN purH PE 3 SV 1
blastp_uniprot_sprot sp|A4XKZ2|PUR9_CALS8 84 643 + 560 Gaps:57 99.61 513 50.29 1e-156 Bifunctional purine biosynthesis protein PurH OS Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN purH PE 3 SV 1
blastp_uniprot_sprot sp|A9VRF5|PUR9_BACWK 84 643 + 560 Gaps:57 99.61 511 49.71 6e-156 Bifunctional purine biosynthesis protein PurH OS Bacillus weihenstephanensis (strain KBAB4) GN purH PE 3 SV 1
blastp_uniprot_sprot sp|Q81IP9|PUR9_BACCR 84 643 + 560 Gaps:57 99.61 511 49.31 1e-155 Bifunctional purine biosynthesis protein PurH OS Bacillus cereus (strain ATCC 14579 / DSM 31) GN purH PE 3 SV 1
blastp_uniprot_sprot sp|B7JM89|PUR9_BACC0 84 643 + 560 Gaps:57 99.61 511 49.31 1e-155 Bifunctional purine biosynthesis protein PurH OS Bacillus cereus (strain AH820) GN purH PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 464 632 169 G3DSA:3.40.140.20 "KEGG:00230+3.5.4.10+2.1.2.3","KEGG:00670+2.1.2.3","MetaCyc:PWY-6123","MetaCyc:PWY-6124","MetaCyc:PWY-7234","UniPathway:UPA00074","UniPathway:UPA00074" none IPR024051
PANTHER 78 523 446 PTHR11692 "KEGG:00230+3.5.4.10+2.1.2.3","KEGG:00670+2.1.2.3","MetaCyc:PWY-6123","MetaCyc:PWY-6124","MetaCyc:PWY-7234","UniPathway:UPA00074","UniPathway:UPA00074";signature_desc=BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN none IPR002695
PANTHER 552 643 92 PTHR11692 "KEGG:00230+3.5.4.10+2.1.2.3","KEGG:00670+2.1.2.3","MetaCyc:PWY-6123","MetaCyc:PWY-6124","MetaCyc:PWY-7234","UniPathway:UPA00074","UniPathway:UPA00074";signature_desc=BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN none IPR002695
SUPERFAMILY 84 274 191 SSF52335 none none IPR011607
Phobius 550 643 94 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 298 525 228 SSF53927 none none IPR016193
SUPERFAMILY 551 643 93 SSF53927 none none IPR016193
Gene3D 83 266 184 G3DSA:3.40.50.1380 none none IPR011607
SMART 216 576 361 SM00798 "KEGG:00230+3.5.4.10+2.1.2.3","KEGG:00670+2.1.2.3","MetaCyc:PWY-6123","MetaCyc:PWY-6124","MetaCyc:PWY-7234","UniPathway:UPA00074","UniPathway:UPA00074" AICARFT/IMPCHase bienzyme IPR002695
Pfam 216 526 311 PF01808 "KEGG:00230+3.5.4.10+2.1.2.3","KEGG:00670+2.1.2.3","MetaCyc:PWY-6123","MetaCyc:PWY-6124","MetaCyc:PWY-7234","UniPathway:UPA00074","UniPathway:UPA00074" AICARFT/IMPCHase bienzyme IPR002695
Phobius 1 523 523 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 524 549 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 332 460 129 G3DSA:3.40.140.20 "KEGG:00230+3.5.4.10+2.1.2.3","KEGG:00670+2.1.2.3","MetaCyc:PWY-6123","MetaCyc:PWY-6124","MetaCyc:PWY-7234","UniPathway:UPA00074","UniPathway:UPA00074" none IPR024051
Hamap 83 643 561 MF_00139 "KEGG:00230+3.5.4.10+2.1.2.3","KEGG:00670+2.1.2.3","MetaCyc:PWY-6123","MetaCyc:PWY-6124","MetaCyc:PWY-7234","UniPathway:UPA00074","UniPathway:UPA00074" Bifunctional purine biosynthesis protein PurH [purH]. IPR002695
SMART 95 211 117 SM00851 none MGS-like domain IPR011607
Pfam 99 210 112 PF02142 none MGS-like domain IPR011607

1 Localization

Analysis Start End Length
TMHMM 526 548 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting