Protein : Qrob_P0514220.2 Q. robur
Protein Identifier  ? Qrob_P0514220.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR11070:SF2 - F-BOX ONLY PROTEIN 18 (PTHR11070:SF2) Code Enzyme  EC:3.6.4.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 122  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016787 hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO:0004003 ATP-dependent DNA helicase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of the DNA helix.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103440063 3 112 + 110 none 19.61 561 77.27 9e-53 uncharacterized LOC103440063
blastp_kegg lcl|mdm:103420760 3 112 + 110 none 12.07 911 79.09 2e-52 ATP-dependent DNA helicase srs2-like
blastp_kegg lcl|vvi:100242461 3 112 + 110 none 9.88 1113 79.09 3e-51 ATP-dependent DNA helicase pcrA-like
blastp_kegg lcl|mdm:103420828 3 112 + 110 none 7.99 1377 77.27 1e-50 uncharacterized LOC103420828
blastp_kegg lcl|pper:PRUPE_ppa000520mg 3 112 + 110 Gaps:1 9.77 1116 79.82 1e-50 hypothetical protein
blastp_kegg lcl|pmum:103333110 3 112 + 110 Gaps:1 9.75 1118 79.82 3e-50 ATP-dependent DNA helicase srs2
blastp_kegg lcl|mdm:103440067 3 112 + 110 none 11.85 928 77.27 3e-50 ATP-dependent DNA helicase srs2
blastp_kegg lcl|fve:101299338 3 112 + 110 none 10.08 1091 76.36 4e-50 ATP-dependent DNA helicase PcrA-like
blastp_kegg lcl|tcc:TCM_014815 3 111 + 109 Gaps:1 9.46 1142 77.78 4e-48 P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1
blastp_kegg lcl|cit:102624147 3 111 + 109 none 9.53 1144 73.39 1e-47 ATP-dependent DNA helicase srs2-like
rpsblast_kog gnl|CDD|37319 12 109 + 98 Gaps:6 10.79 853 33.70 2e-12 KOG2108 KOG2108 KOG2108 3'-5' DNA helicase [Replication recombination and repair].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 4 30 27 G3DSA:3.40.50.300 none none IPR027417
Gene3D 89 112 24 G3DSA:3.40.50.300 none none IPR027417
PANTHER 52 114 63 PTHR11070:SF2 none none none
Pfam 62 111 50 PF13361 none UvrD-like helicase C-terminal domain IPR014017
SUPERFAMILY 24 114 91 SSF52540 none none IPR027417
PANTHER 4 28 25 PTHR11070:SF2 none none none
PANTHER 4 28 25 PTHR11070 none none IPR000212
PANTHER 52 114 63 PTHR11070 none none IPR000212

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting