Protein : Qrob_P0514160.2 Q. robur
Protein Identifier  ? Qrob_P0514160.2 Organism . Name  Quercus robur
Score  81.1 Score Type  egn
Protein Description  (M=2) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)). Code Enzyme  EC:1.4.1.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 412  
Kegg Orthology  K00261
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_014809 1 411 + 411 none 100.00 411 91.00 0.0 Glutamate dehydrogenase 2
blastp_kegg lcl|pop:POPTR_0012s11500g 1 411 + 411 none 100.00 411 89.29 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0015s12250g 1 411 + 411 none 100.00 411 88.56 0.0 POPTRDRAFT_575509 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1502760 1 411 + 411 none 100.00 411 88.56 0.0 glutamate dehydrogenase putative (EC:1.4.1.3)
blastp_kegg lcl|pmum:103333008 1 411 + 411 none 100.00 411 89.29 0.0 glutamate dehydrogenase 2
blastp_kegg lcl|pper:PRUPE_ppa006442mg 1 411 + 411 none 100.00 411 89.29 0.0 hypothetical protein
blastp_kegg lcl|csv:101227388 1 411 + 411 none 100.00 411 89.05 0.0 glutamate dehydrogenase 2-like
blastp_kegg lcl|csv:101202786 1 411 + 411 none 100.00 411 89.05 0.0 glutamate dehydrogenase 2-like
blastp_kegg lcl|cmo:103494446 1 411 + 411 none 100.00 411 88.56 0.0 glutamate dehydrogenase 2
blastp_kegg lcl|cmo:103504697 1 411 + 411 none 100.00 411 88.81 0.0 glutamate dehydrogenase 2-like
blastp_pdb 1b3b_F 10 408 + 399 Gaps:2 96.63 415 48.63 4e-133 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_E 10 408 + 399 Gaps:2 96.63 415 48.63 4e-133 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_D 10 408 + 399 Gaps:2 96.63 415 48.63 4e-133 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_C 10 408 + 399 Gaps:2 96.63 415 48.63 4e-133 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_B 10 408 + 399 Gaps:2 96.63 415 48.63 4e-133 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_A 10 408 + 399 Gaps:2 96.63 415 48.63 4e-133 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b26_F 10 408 + 399 Gaps:2 96.39 416 48.38 1e-131 mol:protein length:416 GLUTAMATE DEHYDROGENASE
blastp_pdb 1b26_E 10 408 + 399 Gaps:2 96.39 416 48.38 1e-131 mol:protein length:416 GLUTAMATE DEHYDROGENASE
blastp_pdb 1b26_D 10 408 + 399 Gaps:2 96.39 416 48.38 1e-131 mol:protein length:416 GLUTAMATE DEHYDROGENASE
blastp_pdb 1b26_C 10 408 + 399 Gaps:2 96.39 416 48.38 1e-131 mol:protein length:416 GLUTAMATE DEHYDROGENASE
blastp_uniprot_sprot sp|O04937|DHEA_NICPL 1 411 + 411 none 100.00 411 88.81 0.0 Glutamate dehydrogenase A OS Nicotiana plumbaginifolia GN GDHA PE 2 SV 1
blastp_uniprot_sprot sp|Q38946|DHE2_ARATH 1 411 + 411 none 100.00 411 87.10 0.0 Glutamate dehydrogenase 2 OS Arabidopsis thaliana GN GDH2 PE 1 SV 1
blastp_uniprot_sprot sp|P52596|DHE3_VITVI 1 411 + 411 none 100.00 411 86.86 0.0 Glutamate dehydrogenase OS Vitis vinifera GN GDH PE 2 SV 1
blastp_uniprot_sprot sp|Q43260|DHE3_MAIZE 1 411 + 411 none 100.00 411 81.51 0.0 Glutamate dehydrogenase OS Zea mays GN GDH1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9S7A0|DHE3_ARATH 1 409 + 409 none 99.51 411 80.44 0.0 Probable glutamate dehydrogenase 3 OS Arabidopsis thaliana GN GSH3 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LEC8|DHEB_NICPL 1 411 + 411 none 100.00 411 80.05 0.0 Glutamate dehydrogenase B OS Nicotiana plumbaginifolia GN GDHB PE 1 SV 1
blastp_uniprot_sprot sp|P93541|DHE3_SOLLC 1 411 + 411 Gaps:1 100.00 412 81.07 0.0 Glutamate dehydrogenase OS Solanum lycopersicum GN GDH1 PE 2 SV 1
blastp_uniprot_sprot sp|Q43314|DHE1_ARATH 1 411 + 411 none 100.00 411 80.05 0.0 Glutamate dehydrogenase 1 OS Arabidopsis thaliana GN GDH1 PE 2 SV 1
blastp_uniprot_sprot sp|P96110|DHE3_THEMA 10 408 + 399 Gaps:2 96.39 416 48.63 7e-132 Glutamate dehydrogenase OS Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN gdhA PE 1 SV 4
blastp_uniprot_sprot sp|Q56304|DHE3_THELI 9 409 + 401 Gaps:4 96.66 419 46.42 9e-125 Glutamate dehydrogenase OS Thermococcus litoralis GN gdhA PE 1 SV 3

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 176 409 234 G3DSA:3.40.50.720 none none IPR016040
SUPERFAMILY 5 178 174 SSF53223 none none none
PIRSF 1 411 411 PIRSF000185 none none IPR014362
PANTHER 1 410 410 PTHR11606 none none none
Pfam 176 408 233 PF00208 none Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IPR006096
Pfam 33 160 128 PF02812 none Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IPR006097
ProSitePatterns 96 109 14 PS00074 none Glu / Leu / Phe / Val dehydrogenases active site. IPR006095
Gene3D 33 174 142 G3DSA:3.40.192.10 none none none
SUPERFAMILY 176 409 234 SSF51735 none none none
PANTHER 1 410 410 PTHR11606:SF5 none none none
SMART 178 408 231 SM00839 none Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IPR006096
PRINTS 88 102 15 PR00082 none Glutamate/leucine/phenylalanine/valine dehydrogenase signature IPR006095
PRINTS 167 189 23 PR00082 none Glutamate/leucine/phenylalanine/valine dehydrogenase signature IPR006095
PRINTS 209 229 21 PR00082 none Glutamate/leucine/phenylalanine/valine dehydrogenase signature IPR006095
PRINTS 336 347 12 PR00082 none Glutamate/leucine/phenylalanine/valine dehydrogenase signature IPR006095

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting