Protein : Qrob_P0513980.2 Q. robur
Protein Identifier  ? Qrob_P0513980.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=34) K15032 - mTERF domain-containing protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 389  
Kegg Orthology  K15032
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100256384 1 388 + 388 none 97.98 396 49.48 4e-129 uncharacterized LOC100256384
blastp_kegg lcl|vvi:100240766 1 385 + 385 Gaps:7 98.44 384 51.85 1e-125 uncharacterized LOC100240766
blastp_kegg lcl|vvi:100252802 30 386 + 357 Gaps:3 90.23 399 53.89 6e-124 uncharacterized LOC100252802
blastp_kegg lcl|vvi:100251002 1 386 + 386 Gaps:1 97.48 397 51.42 2e-122 uncharacterized LOC100251002
blastp_kegg lcl|vvi:100245862 43 383 + 341 none 84.62 403 52.20 1e-119 uncharacterized LOC100245862
blastp_kegg lcl|vvi:100257952 1 385 + 385 none 98.97 389 49.35 2e-119 uncharacterized LOC100257952
blastp_kegg lcl|rcu:RCOM_0089610 34 385 + 352 Gaps:3 80.05 441 51.27 5e-118 hypothetical protein
blastp_kegg lcl|tcc:TCM_021173 7 385 + 379 Gaps:10 95.44 395 49.87 3e-113 Mitochondrial transcription termination factor family protein putative isoform 1
blastp_kegg lcl|tcc:TCM_004562 45 386 + 342 Gaps:1 85.32 402 48.10 1e-110 Mitochondrial transcription termination factor family protein
blastp_kegg lcl|pop:POPTR_0012s04420g 10 385 + 376 Gaps:8 96.39 388 48.40 3e-109 POPTRDRAFT_569735 hypothetical protein
rpsblast_cdd gnl|CDD|202273 90 363 + 274 Gaps:78 99.13 345 23.98 2e-22 pfam02536 mTERF mTERF. This family contains one sequence of known function Human mitochondrial transcription termination factor (mTERF) the rest of the family consists of hypothetical proteins none of which have any functional information. mTERF is a multizipper protein possessing three putative leucine zippers one of which is bipartite. The protein binds DNA as a monomer. The leucine zippers are not implicated in a dimerisation role as in other leucine zippers.
rpsblast_kog gnl|CDD|36481 14 338 + 325 Gaps:12 79.66 413 22.49 3e-32 KOG1267 KOG1267 KOG1267 Mitochondrial transcription termination factor mTERF [Transcription General function prediction only].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 90 271 182 PF02536 none mTERF IPR003690
Pfam 268 363 96 PF02536 none mTERF IPR003690
PANTHER 49 385 337 PTHR13068 none none none
SMART 173 204 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 101 132 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 278 309 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 137 168 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 209 239 31 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 310 344 35 SM00733 none Mitochondrial termination factor repeats IPR003690
PANTHER 49 385 337 PTHR13068:SF15 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting