Protein : Qrob_P0513920.2 Q. robur
Protein Identifier  ? Qrob_P0513920.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=34) K15032 - mTERF domain-containing protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 385  
Kegg Orthology  K15032
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100240766 37 383 + 347 none 90.36 384 56.48 8e-135 uncharacterized LOC100240766
blastp_kegg lcl|vvi:100256384 46 384 + 339 none 85.61 396 54.87 2e-130 uncharacterized LOC100256384
blastp_kegg lcl|vvi:100257952 46 381 + 336 none 86.38 389 56.25 2e-128 uncharacterized LOC100257952
blastp_kegg lcl|vvi:100245862 10 382 + 373 Gaps:10 90.07 403 53.44 1e-127 uncharacterized LOC100245862
blastp_kegg lcl|vvi:100251002 46 384 + 339 none 85.39 397 55.16 1e-126 uncharacterized LOC100251002
blastp_kegg lcl|vvi:100252802 40 384 + 345 none 86.47 399 55.94 2e-126 uncharacterized LOC100252802
blastp_kegg lcl|rcu:RCOM_0089610 27 384 + 358 Gaps:5 81.86 441 52.91 2e-124 hypothetical protein
blastp_kegg lcl|tcc:TCM_046783 1 383 + 383 Gaps:16 95.69 394 51.46 5e-124 Mitochondrial transcription termination factor family protein putative
blastp_kegg lcl|cmo:103484197 1 384 + 384 Gaps:24 100.00 366 52.73 2e-122 uncharacterized LOC103484197
blastp_kegg lcl|tcc:TCM_021170 33 381 + 349 Gaps:2 68.43 510 53.58 8e-122 Mitochondrial transcription termination factor family protein putative
rpsblast_cdd gnl|CDD|202273 82 342 + 261 Gaps:39 95.07 345 32.62 3e-19 pfam02536 mTERF mTERF. This family contains one sequence of known function Human mitochondrial transcription termination factor (mTERF) the rest of the family consists of hypothetical proteins none of which have any functional information. mTERF is a multizipper protein possessing three putative leucine zippers one of which is bipartite. The protein binds DNA as a monomer. The leucine zippers are not implicated in a dimerisation role as in other leucine zippers.
rpsblast_kog gnl|CDD|36481 38 344 + 307 Gaps:10 71.91 413 24.92 3e-28 KOG1267 KOG1267 KOG1267 Mitochondrial transcription termination factor mTERF [Transcription General function prediction only].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 306 340 35 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 133 164 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 274 305 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 169 200 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 97 128 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 205 235 31 SM00733 none Mitochondrial termination factor repeats IPR003690
PANTHER 27 382 356 PTHR13068:SF15 none none none
PANTHER 27 382 356 PTHR13068 none none none
Pfam 266 341 76 PF02536 none mTERF IPR003690
Pfam 85 293 209 PF02536 none mTERF IPR003690

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting