Protein : Qrob_P0510990.2 Q. robur
Protein Identifier  ? Qrob_P0510990.2 Organism . Name  Quercus robur
Protein Description  (M=2) PTHR31867:SF4 - EXPANSIN-A11 (PTHR31867:SF4) Alias (in v1)  Qrob_P0170650.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 256  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005576 extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO:0009664 plant-type cell wall organization A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa010242mg 1 255 + 255 Gaps:1 99.61 257 83.20 1e-158 hypothetical protein
blastp_kegg lcl|pmum:103321209 1 255 + 255 Gaps:1 99.61 257 82.81 3e-158 expansin-A11
blastp_kegg lcl|cam:101505027 1 255 + 255 none 88.24 289 80.00 2e-156 expansin-A11-like
blastp_kegg lcl|rcu:RCOM_1599330 1 255 + 255 Gaps:1 100.00 256 81.25 1e-155 Alpha-expansin 11 precursor putative
blastp_kegg lcl|fve:101299348 1 255 + 255 Gaps:3 98.44 256 84.92 6e-155 expansin-A11-like
blastp_kegg lcl|tcc:TCM_034279 1 255 + 255 none 79.44 321 81.57 2e-154 Expansin 11 ALPHA 1.14 EXPA11
blastp_kegg lcl|vvi:100245385 2 255 + 254 none 99.22 256 81.50 3e-154 expansin-A11-like
blastp_kegg lcl|gmx:548040 1 255 + 255 none 100.00 255 81.18 2e-153 EXP1 expansin
blastp_kegg lcl|pop:POPTR_0002s01950g 1 255 + 255 Gaps:1 100.00 256 80.47 9e-153 POPTRDRAFT_709919 alpha-expansin 11 precursor family protein
blastp_kegg lcl|pxb:103929198 1 255 + 255 none 99.61 256 80.39 1e-152 expansin-A11
blastp_pdb 2hcz_X 29 255 + 227 Gaps:35 92.24 245 31.42 1e-19 mol:protein length:245 Beta-expansin 1a
blastp_pdb 1n10_B 27 252 + 226 Gaps:27 93.36 241 28.44 7e-14 mol:protein length:241 Pollen allergen Phl p 1
blastp_pdb 1n10_A 27 252 + 226 Gaps:27 93.36 241 28.44 7e-14 mol:protein length:241 Pollen allergen Phl p 1
blastp_uniprot_sprot sp|Q9LNU3|EXP11_ARATH 19 255 + 237 none 94.05 252 75.11 4e-134 Expansin-A11 OS Arabidopsis thaliana GN EXPA11 PE 2 SV 1
blastp_uniprot_sprot sp|Q4PR39|EXP29_ORYSJ 14 255 + 242 Gaps:2 92.78 263 71.31 2e-130 Expansin-A29 OS Oryza sativa subsp. japonica GN EXPA29 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XWU8|EXPA1_ORYSJ 21 255 + 235 none 90.04 261 74.47 3e-130 Expansin-A1 OS Oryza sativa subsp. japonica GN EXPA1 PE 2 SV 2
blastp_uniprot_sprot sp|Q4PR52|EXP13_ORYSJ 7 255 + 249 Gaps:1 95.42 262 67.60 2e-126 Expansin-A13 OS Oryza sativa subsp. japonica GN EXPA13 PE 2 SV 2
blastp_uniprot_sprot sp|Q4PR43|EXP23_ORYSJ 25 255 + 231 Gaps:1 86.89 267 71.12 4e-124 Expansin-A23 OS Oryza sativa subsp. japonica GN EXPA23.1 PE 2 SV 2
blastp_uniprot_sprot sp|Q4PR44|EXP22_ORYSJ 25 255 + 231 Gaps:1 82.86 280 71.98 1e-123 Expansin-A22 OS Oryza sativa subsp. japonica GN EXPA22 PE 2 SV 2
blastp_uniprot_sprot sp|Q4PR42|EXP24_ORYSJ 25 255 + 231 Gaps:1 83.45 278 72.41 3e-123 Expansin-A24 OS Oryza sativa subsp. japonica GN EXPA24 PE 2 SV 2
blastp_uniprot_sprot sp|Q7G6Z2|EXP12_ORYSJ 32 255 + 224 Gaps:1 89.20 250 72.20 2e-119 Expansin-A12 OS Oryza sativa subsp. japonica GN EXPA12 PE 2 SV 1
blastp_uniprot_sprot sp|Q4PR51|EXP14_ORYSJ 12 255 + 244 Gaps:10 96.95 262 68.11 7e-116 Expansin-A14 OS Oryza sativa subsp. japonica GN EXPA14 PE 2 SV 2
blastp_uniprot_sprot sp|Q9XHX0|EXPA8_ORYSJ 25 255 + 231 Gaps:1 91.63 251 66.96 4e-115 Expansin-A8 OS Oryza sativa subsp. japonica GN EXPA8 PE 2 SV 1
rpsblast_cdd gnl|CDD|177787 1 255 + 255 Gaps:1 100.00 256 81.64 1e-131 PLN00193 PLN00193 expansin-A Provisional.
rpsblast_cdd gnl|CDD|165628 27 250 + 224 Gaps:3 89.47 247 68.33 2e-87 PLN00050 PLN00050 expansin A Provisional.
rpsblast_cdd gnl|CDD|129070 64 152 + 89 Gaps:2 100.00 87 67.82 2e-39 smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel. Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.
rpsblast_cdd gnl|CDD|201746 163 240 + 78 Gaps:4 100.00 82 48.78 2e-24 pfam01357 Pollen_allerg_1 Pollen allergen. This family contains allergens lol PI PII and PIII from Lolium perenne.
rpsblast_cdd gnl|CDD|202595 64 152 + 89 Gaps:14 100.00 77 46.75 4e-22 pfam03330 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel. Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.
rpsblast_cdd gnl|CDD|178594 29 254 + 226 Gaps:35 89.47 247 29.41 2e-13 PLN03023 PLN03023 Expansin-like B1 Provisional.

31 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 163 240 78 PF01357 none Pollen allergen IPR007117
Pfam 64 151 88 PF03330 none Rare lipoprotein A (RlpA)-like double-psi beta-barrel IPR009009
Phobius 16 23 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 5 255 251 PTHR31867 none none none
SUPERFAMILY 159 251 93 SSF49590 none none IPR007117
PRINTS 137 150 14 PR01226 none Expansin signature IPR002963
PRINTS 120 137 18 PR01226 none Expansin signature IPR002963
PRINTS 208 229 22 PR01226 none Expansin signature IPR002963
PRINTS 237 253 17 PR01226 none Expansin signature IPR002963
PRINTS 59 73 15 PR01226 none Expansin signature IPR002963
PRINTS 101 111 11 PR01226 none Expansin signature IPR002963
PRINTS 161 173 13 PR01226 none Expansin signature IPR002963
PRINTS 88 99 12 PR01226 none Expansin signature IPR002963
PRINTS 173 194 22 PR01226 none Expansin signature IPR002963
PRINTS 145 161 17 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 28 43 16 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 46 64 19 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 68 86 19 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 237 251 15 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 199 213 15 PR01225 none Expansin/Lol pI family signature IPR007118
ProSiteProfiles 47 162 116 PS50842 none Expansin, family-45 endoglucanase-like domain profile. IPR007112
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
ProSiteProfiles 172 251 80 PS50843 none Expansin, Cellulose-binding-like domain profile. IPR007117
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 28 180 153 SSF50685 none none IPR009009
Gene3D 19 156 138 G3DSA:2.40.40.10 none none IPR014733
Gene3D 157 255 99 G3DSA:2.60.40.760 none none IPR007117
SMART 64 152 89 SM00837 none Rare lipoprotein A (RlpA)-like double-psi beta-barrel IPR007112
Phobius 24 255 232 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

1 Localization

Analysis Start End Length
TMHMM 7 29 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting