Protein : Qrob_P0510620.2 Q. robur
Protein Identifier  ? Qrob_P0510620.2 Organism . Name  Quercus robur
Score  69.0 Score Type  egn
Protein Description  (M=1) 1.1.1.85 - 3-isopropylmalate dehydrogenase. Code Enzyme  EC:1.1.1.85
Gene Prediction Quality  validated Protein length 

Sequence

Length: 275  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_027344 4 270 + 267 Gaps:37 76.11 406 51.13 3e-34 Isopropylmalate dehydrogenase 2 isoform 1
blastp_kegg lcl|csv:101229174 4 269 + 266 Gaps:8 44.44 405 72.78 1e-33 3-isopropylmalate dehydrogenase chloroplastic-like
blastp_kegg lcl|csv:101211790 4 269 + 266 Gaps:8 44.44 405 72.78 1e-33 3-isopropylmalate dehydrogenase chloroplastic-like
blastp_kegg lcl|cmo:103494678 4 269 + 266 Gaps:8 44.44 405 72.22 1e-33 3-isopropylmalate dehydrogenase chloroplastic-like
blastp_kegg lcl|pmum:103328136 7 269 + 263 Gaps:35 75.00 404 53.47 1e-33 3-isopropylmalate dehydrogenase 2 chloroplastic-like
blastp_kegg lcl|pop:POPTR_0001s18630g 4 270 + 267 Gaps:45 75.43 407 52.44 3e-33 POPTRDRAFT_1067569 3-isopropylmalate dehydrogenase 2 family protein
blastp_kegg lcl|pper:PRUPE_ppa006579mg 4 269 + 266 Gaps:35 75.74 404 52.61 8e-33 hypothetical protein
blastp_kegg lcl|brp:103850918 32 270 + 239 Gaps:31 69.21 406 51.60 2e-32 3-isopropylmalate dehydrogenase 3 chloroplastic
blastp_kegg lcl|sly:101247914 31 270 + 240 Gaps:36 69.21 406 50.18 4e-32 3-isopropylmalate dehydrogenase chloroplastic-like
blastp_kegg lcl|fve:101300405 3 269 + 267 Gaps:38 76.35 406 51.29 6e-32 3-isopropylmalate dehydrogenase 2 chloroplastic-like
blastp_pdb 3r8w_D 32 269 + 238 Gaps:31 72.10 405 49.32 4e-32 mol:protein length:405 3-isopropylmalate dehydrogenase 2 chloroplas
blastp_pdb 3r8w_C 32 269 + 238 Gaps:31 72.10 405 49.32 4e-32 mol:protein length:405 3-isopropylmalate dehydrogenase 2 chloroplas
blastp_pdb 3r8w_B 32 269 + 238 Gaps:31 72.10 405 49.32 4e-32 mol:protein length:405 3-isopropylmalate dehydrogenase 2 chloroplas
blastp_pdb 3r8w_A 32 269 + 238 Gaps:31 72.10 405 49.32 4e-32 mol:protein length:405 3-isopropylmalate dehydrogenase 2 chloroplas
blastp_pdb 1a05_B 201 270 + 70 none 19.55 358 61.43 3e-20 mol:protein length:358 3-ISOPROPYLMALATE DEHYDROGENASE
blastp_pdb 1a05_A 201 270 + 70 none 19.55 358 61.43 3e-20 mol:protein length:358 3-ISOPROPYLMALATE DEHYDROGENASE
blastp_pdb 3u1h_B 201 269 + 69 none 17.69 390 62.32 1e-19 mol:protein length:390 3-isopropylmalate dehydrogenase
blastp_pdb 3u1h_A 201 269 + 69 none 17.69 390 62.32 1e-19 mol:protein length:390 3-isopropylmalate dehydrogenase
blastp_pdb 2ayq_B 204 268 + 65 none 17.76 366 63.08 2e-18 mol:protein length:366 3-ISOPROPYLMALATE DEHYDROGENASE
blastp_pdb 2ayq_A 204 268 + 65 none 17.76 366 63.08 2e-18 mol:protein length:366 3-ISOPROPYLMALATE DEHYDROGENASE
blastp_uniprot_sprot sp|Q9FMT1|LEU33_ARATH 32 270 + 239 Gaps:31 68.70 409 50.53 2e-32 3-isopropylmalate dehydrogenase 3 chloroplastic OS Arabidopsis thaliana GN IMDH3 PE 1 SV 1
blastp_uniprot_sprot sp|P29102|LEU3_BRANA 32 269 + 238 Gaps:31 71.92 406 49.32 6e-32 3-isopropylmalate dehydrogenase chloroplastic OS Brassica napus PE 1 SV 1
blastp_uniprot_sprot sp|P93832|LEU32_ARATH 32 269 + 238 Gaps:31 72.10 405 49.32 2e-31 3-isopropylmalate dehydrogenase 2 chloroplastic OS Arabidopsis thaliana GN IMDH2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SA14|LEU31_ARATH 32 270 + 239 Gaps:29 69.55 404 49.11 2e-31 3-isopropylmalate dehydrogenase 1 chloroplastic OS Arabidopsis thaliana GN IMDH1 PE 2 SV 2
blastp_uniprot_sprot sp|Q5MZ40|LEU3_SYNP6 201 269 + 69 none 18.90 365 75.36 8e-27 3-isopropylmalate dehydrogenase OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN leuB PE 3 SV 2
blastp_uniprot_sprot sp|Q31N34|LEU3_SYNE7 201 269 + 69 none 18.90 365 75.36 8e-27 3-isopropylmalate dehydrogenase OS Synechococcus elongatus (strain PCC 7942) GN leuB PE 3 SV 1
blastp_uniprot_sprot sp|P73960|LEU3_SYNY3 201 270 + 70 none 19.34 362 70.00 4e-25 3-isopropylmalate dehydrogenase OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN leuB PE 3 SV 1
blastp_uniprot_sprot sp|Q8YXA2|LEU3_NOSS1 202 269 + 68 none 18.78 362 69.12 1e-23 3-isopropylmalate dehydrogenase OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN leuB PE 3 SV 1
blastp_uniprot_sprot sp|Q2JTN8|LEU3_SYNJA 202 269 + 68 none 17.85 381 67.65 2e-23 3-isopropylmalate dehydrogenase OS Synechococcus sp. (strain JA-3-3Ab) GN leuB PE 3 SV 1
blastp_uniprot_sprot sp|Q3M8T9|LEU3_ANAVT 202 269 + 68 none 18.78 362 67.65 1e-22 3-isopropylmalate dehydrogenase OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN leuB PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 43 270 228 SSF53659 none none none
PANTHER 202 270 69 PTHR11835 "Reactome:REACT_1046";signature_desc=DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE none IPR001804
Gene3D 200 268 69 G3DSA:3.40.718.10 none none IPR024084
Gene3D 38 71 34 G3DSA:3.40.718.10 none none IPR024084
PANTHER 202 270 69 PTHR11835:SF40 none none none
Pfam 191 268 78 PF00180 none Isocitrate/isopropylmalate dehydrogenase IPR024084

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting