Protein : Qrob_P0502930.2 Q. robur
Protein Identifier  ? Qrob_P0502930.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR10015:SF139 - HEAT STRESS TRANSCRIPTION FACTOR A-6A-RELATED (PTHR10015:SF139) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 381  
Kegg Orthology  K09419
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_037308 1 378 + 378 Gaps:27 100.00 391 69.82 0.0 Heat shock transcription factor A2 isoform 1
blastp_kegg lcl|pop:POPTR_0006s24330g 1 368 + 368 Gaps:6 95.36 388 75.14 0.0 POPTRDRAFT_763234 hypothetical protein
blastp_kegg lcl|fve:101312795 1 368 + 368 Gaps:16 97.85 372 74.45 0.0 heat shock factor protein HSF30-like isoform 1
blastp_kegg lcl|pper:PRUPE_ppa007300mg 1 368 + 368 Gaps:18 97.86 374 74.86 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10008617mg 1 368 + 368 Gaps:14 98.96 384 67.37 5e-179 hypothetical protein
blastp_kegg lcl|cit:102620157 1 368 + 368 Gaps:14 98.96 384 67.37 5e-179 heat shock factor protein HSF30-like
blastp_kegg lcl|pmum:103320570 1 358 + 358 Gaps:18 96.74 368 75.56 1e-176 heat shock factor protein HSF30
blastp_kegg lcl|vvi:100245740 1 370 + 370 Gaps:20 95.88 388 71.51 2e-175 heat shock factor protein HSF30-like
blastp_kegg lcl|gmx:100794605 1 372 + 372 Gaps:21 99.19 372 66.12 2e-170 heat shock factor protein HSF30-like
blastp_kegg lcl|rcu:RCOM_0705960 1 378 + 378 Gaps:11 100.00 371 70.89 6e-169 Heat shock factor protein HSF30 putative
blastp_pdb 2ldu_A 40 131 + 92 Gaps:11 82.40 125 49.51 3e-25 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 1hkt_A 38 131 + 94 Gaps:10 98.11 106 37.50 6e-17 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 38 131 + 94 Gaps:10 98.11 106 37.50 6e-17 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hts_B 37 115 + 79 Gaps:11 88.24 102 41.11 4e-16 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 40 115 + 76 Gaps:11 94.57 92 42.53 8e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 40 115 + 76 Gaps:11 94.57 92 42.53 8e-16 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 40 115 + 76 Gaps:11 94.57 92 42.53 8e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 40 115 + 76 Gaps:11 94.57 92 42.53 8e-16 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 40 115 + 76 Gaps:11 94.57 92 42.53 8e-16 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 40 115 + 76 Gaps:11 94.57 92 42.53 8e-16 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|P41152|HSF30_SOLPE 30 368 + 339 Gaps:18 93.73 351 62.61 8e-144 Heat shock factor protein HSF30 OS Solanum peruvianum GN HSF30 PE 2 SV 1
blastp_uniprot_sprot sp|O80982|HSFA2_ARATH 28 372 + 345 Gaps:39 90.43 345 63.14 1e-131 Heat stress transcription factor A-2 OS Arabidopsis thaliana GN HSFA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6VBB2|HFA2B_ORYSJ 6 339 + 334 Gaps:22 92.47 372 47.38 2e-97 Heat stress transcription factor A-2b OS Oryza sativa subsp. japonica GN HSFA2B PE 2 SV 1
blastp_uniprot_sprot sp|Q6F388|HFA2E_ORYSJ 17 336 + 320 Gaps:18 90.20 357 49.07 4e-95 Heat stress transcription factor A-2e OS Oryza sativa subsp. japonica GN HSFA2E PE 2 SV 1
blastp_uniprot_sprot sp|Q8H7Y6|HFA2D_ORYSJ 5 324 + 320 Gaps:19 88.30 359 48.26 7e-90 Heat stress transcription factor A-2d OS Oryza sativa subsp. japonica GN HSFA2D PE 2 SV 2
blastp_uniprot_sprot sp|Q338B0|HFA2C_ORYSJ 27 240 + 214 Gaps:3 60.06 358 61.86 2e-87 Heat stress transcription factor A-2c OS Oryza sativa subsp. japonica GN HSFA2C PE 1 SV 2
blastp_uniprot_sprot sp|Q9LUH8|HFA6B_ARATH 28 350 + 323 Gaps:40 85.96 406 44.41 2e-87 Heat stress transcription factor A-6b OS Arabidopsis thaliana GN HSFA6b PE 2 SV 1
blastp_uniprot_sprot sp|Q84MN7|HFA2A_ORYSJ 4 240 + 237 Gaps:27 70.21 376 53.03 2e-86 Heat stress transcription factor A-2a OS Oryza sativa subsp. japonica GN HSFA2A PE 2 SV 1
blastp_uniprot_sprot sp|Q84T61|HSFA1_ORYSJ 38 241 + 204 Gaps:8 41.50 506 58.57 2e-79 Heat stress transcription factor A-1 OS Oryza sativa subsp. japonica GN HSFA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q657C0|HFA6B_ORYSJ 28 368 + 341 Gaps:37 79.10 402 47.80 2e-78 Heat stress transcription factor A-6a OS Oryza sativa subsp. japonica GN HSFA6B PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 42 133 92 PF00447 none HSF-type DNA-binding IPR000232
PANTHER 26 370 345 PTHR10015 none none IPR027725
Gene3D 38 131 94 G3DSA:1.10.10.10 none none IPR011991
PRINTS 42 65 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 93 105 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 80 92 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
SMART 38 131 94 SM00415 none heat shock factor IPR000232
ProSiteProfiles 1 25 25 PS51257 none Prokaryotic membrane lipoprotein lipid attachment site profile. none
ProSitePatterns 81 105 25 PS00434 none HSF-type DNA-binding domain signature. IPR000232
SUPERFAMILY 38 131 94 SSF46785 none none none
Coils 158 200 43 Coil none none none
PANTHER 26 370 345 PTHR10015:SF139 none none IPR027709

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting