Protein : Qrob_P0500880.2 Q. robur
Protein Identifier  ? Qrob_P0500880.2 Organism . Name  Quercus robur
Score  93.0 Score Type  egn
Protein Description  (M=1) K00606 - 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Code Enzyme  EC:2.1.2.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 273  
Kegg Orthology  K00606
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity Catalysis of the reaction: 5,10-methylenetetrahydrofolate + 3-methyl-2-oxobutanoate = tetrahydrofolate + 2-dehydropantoate.
GO:0015940 pantothenate biosynthetic process The chemical reactions and pathways resulting in the formation of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|aly:ARALYDRAFT_486638 19 259 + 241 none 68.27 353 91.29 2e-158 hypothetical protein
blastp_kegg lcl|ath:AT2G46110 25 259 + 235 none 67.72 347 93.19 8e-158 KPHMT1 ketopantoate hydroxymethyltransferase 1
blastp_kegg lcl|mdm:103439167 4 259 + 256 none 72.93 351 84.38 4e-157 3-methyl-2-oxobutanoate hydroxymethyltransferase-like
blastp_kegg lcl|pxb:103956322 4 259 + 256 none 72.93 351 84.38 8e-157 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 mitochondrial-like
blastp_kegg lcl|pxb:103956321 4 259 + 256 none 72.93 351 84.38 8e-157 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 mitochondrial-like
blastp_kegg lcl|mdm:103420650 4 259 + 256 none 72.93 351 84.38 9e-157 3-methyl-2-oxobutanoate hydroxymethyltransferase-like
blastp_kegg lcl|eus:EUTSA_v10001521mg 25 259 + 235 none 66.76 352 92.77 1e-156 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10023547mg 25 259 + 235 none 67.72 347 92.77 1e-156 hypothetical protein
blastp_kegg lcl|brp:103830302 22 259 + 238 none 68.59 347 91.60 5e-156 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa007963mg 1 259 + 259 Gaps:4 72.86 350 83.92 5e-156 hypothetical protein
blastp_pdb 1oy0_E 33 260 + 228 Gaps:6 81.14 281 48.25 9e-62 mol:protein length:281 Ketopantoate hydroxymethyltransferase
blastp_pdb 1oy0_D 33 260 + 228 Gaps:6 81.14 281 48.25 9e-62 mol:protein length:281 Ketopantoate hydroxymethyltransferase
blastp_pdb 1oy0_C 33 260 + 228 Gaps:6 81.14 281 48.25 9e-62 mol:protein length:281 Ketopantoate hydroxymethyltransferase
blastp_pdb 1oy0_B 33 260 + 228 Gaps:6 81.14 281 48.25 9e-62 mol:protein length:281 Ketopantoate hydroxymethyltransferase
blastp_pdb 1oy0_A 33 260 + 228 Gaps:6 81.14 281 48.25 9e-62 mol:protein length:281 Ketopantoate hydroxymethyltransferase
blastp_pdb 3ez4_J 49 259 + 211 Gaps:3 77.32 269 45.67 3e-48 mol:protein length:269 3-methyl-2-oxobutanoate hydroxymethyltransfer
blastp_pdb 3ez4_I 49 259 + 211 Gaps:3 77.32 269 45.67 3e-48 mol:protein length:269 3-methyl-2-oxobutanoate hydroxymethyltransfer
blastp_pdb 3ez4_H 49 259 + 211 Gaps:3 77.32 269 45.67 3e-48 mol:protein length:269 3-methyl-2-oxobutanoate hydroxymethyltransfer
blastp_pdb 3ez4_G 49 259 + 211 Gaps:3 77.32 269 45.67 3e-48 mol:protein length:269 3-methyl-2-oxobutanoate hydroxymethyltransfer
blastp_pdb 3ez4_F 49 259 + 211 Gaps:3 77.32 269 45.67 3e-48 mol:protein length:269 3-methyl-2-oxobutanoate hydroxymethyltransfer
blastp_uniprot_sprot sp|Q7NMK3|PANB_GLOVI 49 260 + 212 none 81.54 260 52.36 3e-72 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Gloeobacter violaceus (strain PCC 7421) GN panB PE 3 SV 2
blastp_uniprot_sprot sp|Q9Y7B6|PANB_EMENI 39 268 + 230 Gaps:2 65.90 349 50.43 3e-71 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN panB PE 3 SV 1
blastp_uniprot_sprot sp|B8HWP9|PANB_CYAP4 49 259 + 211 none 80.84 261 53.08 4e-71 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN panB PE 3 SV 1
blastp_uniprot_sprot sp|B0TC10|PANB_HELMI 47 259 + 213 Gaps:3 76.81 276 50.00 9e-70 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN panB PE 3 SV 1
blastp_uniprot_sprot sp|Q3A9L0|PANB_CARHZ 48 260 + 213 Gaps:1 76.81 276 50.47 5e-69 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN panB PE 3 SV 1
blastp_uniprot_sprot sp|Q2RM79|PANB_MOOTA 48 260 + 213 Gaps:1 78.81 269 53.77 1e-67 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Moorella thermoacetica (strain ATCC 39073) GN panB PE 3 SV 1
blastp_uniprot_sprot sp|B0BYP7|PANB_ACAM1 49 259 + 211 none 81.47 259 49.76 8e-67 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Acaryochloris marina (strain MBIC 11017) GN panB PE 3 SV 1
blastp_uniprot_sprot sp|Q47R98|PANB_THEFY 29 260 + 232 Gaps:5 81.07 280 49.34 1e-66 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Thermobifida fusca (strain YX) GN panB PE 3 SV 1
blastp_uniprot_sprot sp|Q3ZXG0|PANB_DEHSC 48 260 + 213 Gaps:1 75.99 279 49.06 1e-66 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Dehalococcoides sp. (strain CBDB1) GN panB PE 3 SV 1
blastp_uniprot_sprot sp|A5FR68|PANB_DEHSB 48 260 + 213 Gaps:1 75.99 279 49.06 2e-66 3-methyl-2-oxobutanoate hydroxymethyltransferase OS Dehalococcoides sp. (strain BAV1) GN panB PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 28 259 232 PTHR20881 "KEGG:00770+2.1.2.11","MetaCyc:PWY-6654","UniPathway:UPA00028";signature_desc=3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE none IPR003700
PANTHER 28 259 232 PTHR20881:SF0 none none none
Pfam 48 259 212 PF02548 "KEGG:00770+2.1.2.11","MetaCyc:PWY-6654","UniPathway:UPA00028" Ketopantoate hydroxymethyltransferase IPR003700
SUPERFAMILY 48 260 213 SSF51621 none none IPR015813
PIRSF 39 261 223 PIRSF000388 "KEGG:00770+2.1.2.11","MetaCyc:PWY-6654","UniPathway:UPA00028" none IPR003700
Gene3D 47 260 214 G3DSA:3.20.20.60 none none IPR015813
TIGRFAM 49 259 211 TIGR00222 "KEGG:00770+2.1.2.11","MetaCyc:PWY-6654","UniPathway:UPA00028" panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase IPR003700

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting