Protein : Qrob_P0496750.2 Q. robur
Protein Identifier  ? Qrob_P0496750.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K11290 - template-activating factor I Gene Prediction Quality  validated
Protein length 

Sequence

Length: 271  
Kegg Orthology  K11290
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006334 nucleosome assembly The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100244926 1 263 + 263 Gaps:2 97.39 268 82.76 5e-132 protein SET-like
blastp_kegg lcl|pmum:103338532 1 225 + 225 Gaps:4 84.15 265 84.75 3e-129 NAP1-related protein 1
blastp_kegg lcl|pper:PRUPE_ppa010080mg 1 225 + 225 Gaps:4 84.15 265 84.75 3e-129 hypothetical protein
blastp_kegg lcl|mdm:103455345 1 225 + 225 Gaps:4 83.83 266 84.75 3e-128 NAP1-related protein 2
blastp_kegg lcl|cmo:103485375 1 225 + 225 Gaps:3 84.09 264 84.68 8e-128 NAP1-related protein 2
blastp_kegg lcl|cit:102620905 1 225 + 225 Gaps:5 84.62 260 83.64 1e-127 NAP1-related protein 2-like
blastp_kegg lcl|tcc:TCM_013948 1 227 + 227 Gaps:14 86.08 273 80.85 3e-127 NAP1-related protein 2
blastp_kegg lcl|cic:CICLE_v10021771mg 1 225 + 225 Gaps:5 84.62 260 83.18 8e-127 hypothetical protein
blastp_kegg lcl|mdm:103437814 1 270 + 270 Gaps:6 100.00 266 79.32 7e-126 NAP1-related protein 2-like
blastp_kegg lcl|pxb:103958727 1 270 + 270 Gaps:6 100.00 266 79.32 3e-124 NAP1-related protein 2
blastp_pdb 2e50_Q 31 223 + 193 Gaps:9 84.44 225 45.26 2e-53 mol:protein length:225 Protein SET
blastp_pdb 2e50_P 31 223 + 193 Gaps:9 84.44 225 45.26 2e-53 mol:protein length:225 Protein SET
blastp_pdb 2e50_B 31 223 + 193 Gaps:9 84.44 225 45.26 2e-53 mol:protein length:225 Protein SET
blastp_pdb 2e50_A 31 223 + 193 Gaps:9 84.44 225 45.26 2e-53 mol:protein length:225 Protein SET
blastp_pdb 3kyp_F 32 223 + 192 Gaps:9 96.89 193 33.16 1e-26 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_E 32 223 + 192 Gaps:9 96.89 193 33.16 1e-26 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_D 32 223 + 192 Gaps:9 96.89 193 33.16 1e-26 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_C 32 223 + 192 Gaps:9 96.89 193 33.16 1e-26 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_B 32 223 + 192 Gaps:9 96.89 193 33.16 1e-26 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_A 32 223 + 192 Gaps:9 96.89 193 33.16 1e-26 mol:protein length:193 Nucleosome assembly protein
blastp_uniprot_sprot sp|Q8LC68|NRP2_ARATH 1 225 + 225 Gaps:7 86.27 255 78.18 3e-114 NAP1-related protein 2 OS Arabidopsis thaliana GN NRP2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9CA59|NRP1_ARATH 24 227 + 204 Gaps:3 80.08 256 76.10 1e-104 NAP1-related protein 1 OS Arabidopsis thaliana GN NRP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q69JW2|NRP2_ORYSJ 3 225 + 223 Gaps:2 87.70 252 70.59 5e-104 NAP1-related protein 2 OS Oryza sativa subsp. japonica GN Os02g0576700 PE 2 SV 1
blastp_uniprot_sprot sp|B8AEC1|NRP2_ORYSI 3 225 + 223 Gaps:2 87.70 252 70.59 9e-104 NAP1-related protein 2 OS Oryza sativa subsp. indica GN OsI_07785 PE 2 SV 1
blastp_uniprot_sprot sp|Q7X7C9|NRP1_ORYSJ 5 226 + 222 Gaps:6 83.40 259 66.20 6e-95 NAP1-related protein 1 OS Oryza sativa subsp. japonica GN Os04g0459700 PE 2 SV 1
blastp_uniprot_sprot sp|A2XU85|NRP1_ORYSI 5 226 + 222 Gaps:6 83.40 259 66.20 6e-95 NAP1-related protein 1 OS Oryza sativa subsp. indica GN H0219H12.3 PE 3 SV 1
blastp_uniprot_sprot sp|P53997|SET_DROME 31 223 + 193 Gaps:12 72.49 269 47.18 5e-55 Protein SET OS Drosophila melanogaster GN Set PE 1 SV 2
blastp_uniprot_sprot sp|Q01105|SET_HUMAN 31 223 + 193 Gaps:9 65.52 290 44.74 7e-51 Protein SET OS Homo sapiens GN SET PE 1 SV 3
blastp_uniprot_sprot sp|Q9EQU5|SET_MOUSE 31 223 + 193 Gaps:9 65.74 289 44.74 1e-50 Protein SET OS Mus musculus GN Set PE 1 SV 1
blastp_uniprot_sprot sp|Q63945|SET_RAT 31 223 + 193 Gaps:9 65.74 289 44.74 1e-50 Protein SET OS Rattus norvegicus GN Set PE 2 SV 2

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 6 224 219 SSF143113 none none none
Coils 28 60 33 Coil none none none
PANTHER 1 270 270 PTHR11875:SF49 none none none
PANTHER 1 270 270 PTHR11875 none none IPR002164
Pfam 32 226 195 PF00956 none Nucleosome assembly protein (NAP) IPR002164

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting