Protein : Qrob_P0493480.2 Q. robur
Protein Identifier  ? Qrob_P0493480.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) 1.6.3.1 - NAD(P)H oxidase. Code Enzyme  EC:1.6.3.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 884  
Kegg Orthology  K13447
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0004601 peroxidase activity Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule.
GO:0016174 NAD(P)H oxidase activity Catalysis of the reaction: NAD(P)H + H+ + O2 = NAD(P)+ + hydrogen peroxide.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10000227mg 1 883 + 883 Gaps:48 100.00 889 78.07 0.0 hypothetical protein
blastp_kegg lcl|cit:102610370 1 883 + 883 Gaps:48 100.00 889 78.07 0.0 respiratory burst oxidase homolog protein B-like
blastp_kegg lcl|rcu:RCOM_1433130 4 883 + 880 Gaps:48 99.55 888 77.38 0.0 respiratory burst oxidase putative (EC:1.6.3.1)
blastp_kegg lcl|pop:POPTR_0005s02630g 1 883 + 883 Gaps:55 100.00 876 77.97 0.0 respiratory burst oxidase protein B
blastp_kegg lcl|gmx:100820185 5 883 + 879 Gaps:51 99.44 887 75.51 0.0 respiratory burst oxidase homolog protein B-like
blastp_kegg lcl|tcc:TCM_026646 1 883 + 883 Gaps:48 100.00 889 75.93 0.0 Respiratory burst oxidase B
blastp_kegg lcl|cmo:103492165 1 883 + 883 Gaps:46 100.00 889 75.03 0.0 respiratory burst oxidase homolog protein B
blastp_kegg lcl|pper:PRUPE_ppa019730mg 1 883 + 883 Gaps:54 100.00 893 74.80 0.0 hypothetical protein
blastp_kegg lcl|pmum:103344591 1 883 + 883 Gaps:55 100.00 894 75.17 0.0 respiratory burst oxidase homolog protein B
blastp_kegg lcl|csv:101206498 1 883 + 883 Gaps:46 100.00 889 74.47 0.0 respiratory burst oxidase homolog protein B-like
blastp_pdb 3a8r_B 116 307 + 192 Gaps:20 96.09 179 63.37 4e-65 mol:protein length:179 Putative uncharacterized protein
blastp_pdb 3a8r_A 116 307 + 192 Gaps:20 96.09 179 63.37 4e-65 mol:protein length:179 Putative uncharacterized protein
blastp_pdb 3a1f_A 696 883 + 188 Gaps:14 100.00 186 34.41 2e-27 mol:protein length:186 Cytochrome b-245 heavy chain
blastp_uniprot_sprot sp|Q948T9|RBOHB_SOLTU 5 883 + 879 Gaps:43 99.65 867 74.77 0.0 Respiratory burst oxidase homolog protein B OS Solanum tuberosum GN RBOHB PE 1 SV 1
blastp_uniprot_sprot sp|Q2HXL0|RBOHC_SOLTU 1 883 + 883 Gaps:101 100.00 938 60.34 0.0 Respiratory burst oxidase homolog protein C OS Solanum tuberosum GN RBOHC PE 1 SV 2
blastp_uniprot_sprot sp|Q5ZAJ0|RBOHB_ORYSJ 2 883 + 882 Gaps:71 98.23 905 62.20 0.0 Respiratory burst oxidase homolog protein B OS Oryza sativa subsp. japonica GN RBOHB PE 1 SV 1
blastp_uniprot_sprot sp|Q6J2K5|RBOHB_ORYSI 2 883 + 882 Gaps:71 98.23 905 62.20 0.0 Respiratory burst oxidase homolog protein B OS Oryza sativa subsp. indica GN RBOHB PE 2 SV 1
blastp_uniprot_sprot sp|Q9SBI0|RBOHB_ARATH 45 883 + 839 Gaps:62 96.68 843 68.47 0.0 Respiratory burst oxidase homolog protein B OS Arabidopsis thaliana GN RBOHB PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIJ0|RBOHD_ARATH 2 883 + 882 Gaps:81 97.83 921 59.60 0.0 Respiratory burst oxidase homolog protein D OS Arabidopsis thaliana GN RBOHD PE 1 SV 1
blastp_uniprot_sprot sp|O81210|RBOHC_ARATH 10 883 + 874 Gaps:81 99.56 905 60.04 0.0 Respiratory burst oxidase homolog protein C OS Arabidopsis thaliana GN RBOHC PE 2 SV 2
blastp_uniprot_sprot sp|Q2HXK9|RBOHD_SOLTU 35 883 + 849 Gaps:54 98.48 858 61.89 0.0 Respiratory burst oxidase homolog protein D OS Solanum tuberosum GN RBOHD PE 1 SV 2
blastp_uniprot_sprot sp|O81209|RBOHA_ARATH 34 883 + 850 Gaps:68 96.67 902 58.37 0.0 Respiratory burst oxidase homolog protein A OS Arabidopsis thaliana GN RBOHA PE 2 SV 2
blastp_uniprot_sprot sp|Q9SW17|RBOHG_ARATH 104 883 + 780 Gaps:50 91.64 849 59.13 0.0 Putative respiratory burst oxidase homolog protein G OS Arabidopsis thaliana GN RBOHG PE 2 SV 2
rpsblast_cdd gnl|CDD|203841 712 862 + 151 Gaps:13 97.99 149 48.63 8e-46 pfam08030 NAD_binding_6 Ferric reductase NAD binding domain.
rpsblast_cdd gnl|CDD|203934 116 210 + 95 Gaps:1 100.00 96 65.62 4e-41 pfam08414 NADPH_Ox Respiratory burst NADPH oxidase. This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N-terminus of an EF-hand (pfam00036) which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants.
rpsblast_cdd gnl|CDD|99783 594 796 + 203 Gaps:28 88.10 210 30.27 3e-39 cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes but are now also implicated in cell signaling and metabolism. NOX has a 6-alpha helix heme-binding transmembrane domain fused to a flavoprotein with the nucleotide binding domain located in the cytoplasm. Duox enzymes link a peroxidase domain to the NOX domain via a single transmembrane and EF-hand Ca2+ binding sites. The flavoprotein module has a ferredoxin like FAD/NADPH binding domain. In classical phagocytic NOX2 electron transfer occurs from NADPH to FAD to the heme of cytb to oxygen leading to superoxide formation..
rpsblast_cdd gnl|CDD|149226 592 706 + 115 Gaps:17 97.09 103 48.00 4e-32 pfam08022 FAD_binding_8 FAD-binding domain.
rpsblast_cdd gnl|CDD|178437 519 734 + 216 Gaps:30 26.59 722 36.98 1e-25 PLN02844 PLN02844 oxidoreductase/ferric-chelate reductase.
rpsblast_cdd gnl|CDD|178238 495 744 + 250 Gaps:47 29.90 699 32.06 1e-19 PLN02631 PLN02631 ferric-chelate reductase.
rpsblast_cdd gnl|CDD|177929 530 735 + 206 Gaps:35 25.50 702 31.84 7e-19 PLN02292 PLN02292 ferric-chelate reductase.

33 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 583 713 131 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 352 371 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 112 210 99 PF08414 none Respiratory burst NADPH oxidase IPR013623
Phobius 492 513 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 565 582 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 139 272 134 G3DSA:1.10.238.10 none none IPR011992
SMART 211 239 29 SM00054 none EF-hand, calcium binding motif IPR002048
Phobius 554 564 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 712 864 153 PF08030 none Ferric reductase NAD binding domain IPR013121
Phobius 372 491 120 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 220 232 13 PS00018 none EF-hand calcium-binding domain. IPR018247
Gene3D 592 663 72 G3DSA:2.40.30.10 none none none
SUPERFAMILY 137 272 136 SSF47473 none none none
ProSiteProfiles 587 708 122 PS51384 none Ferredoxin reductase-type FAD binding domain profile. IPR017927
PANTHER 293 883 591 PTHR11972:SF57 none none IPR029654
PANTHER 112 272 161 PTHR11972:SF57 none none IPR029654
Phobius 714 731 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 591 705 115 PF08022 none FAD-binding domain IPR013112
PANTHER 112 272 161 PTHR11972 none none none
Phobius 1 351 351 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 514 532 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 710 883 174 SSF52343 none none none
PRINTS 717 734 18 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
PRINTS 530 550 21 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
PRINTS 437 455 19 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
PRINTS 843 861 19 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
Gene3D 711 881 171 G3DSA:3.40.50.80 none none none
SUPERFAMILY 591 704 114 SSF63380 none none IPR017938
ProSiteProfiles 207 242 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Phobius 732 883 152 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

4 Localization

Analysis Start End Length
TMHMM 714 731 17
TMHMM 352 371 19
TMHMM 492 514 22
TMHMM 534 556 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting