Protein : Qrob_P0493470.2 Q. robur
Protein Identifier  ? Qrob_P0493470.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) 1.6.3.1 - NAD(P)H oxidase. Code Enzyme  EC:1.6.3.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 886  
Kegg Orthology  K13447
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0004601 peroxidase activity Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule.
GO:0016174 NAD(P)H oxidase activity Catalysis of the reaction: NAD(P)H + H+ + O2 = NAD(P)+ + hydrogen peroxide.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1433130 1 885 + 885 Gaps:7 100.00 888 84.91 0.0 respiratory burst oxidase putative (EC:1.6.3.1)
blastp_kegg lcl|pop:POPTR_0005s02630g 1 885 + 885 Gaps:13 100.00 876 85.84 0.0 respiratory burst oxidase protein B
blastp_kegg lcl|cic:CICLE_v10000227mg 1 885 + 885 Gaps:6 100.00 889 83.80 0.0 hypothetical protein
blastp_kegg lcl|cit:102610370 1 885 + 885 Gaps:6 100.00 889 83.80 0.0 respiratory burst oxidase homolog protein B-like
blastp_kegg lcl|gmx:100820185 1 885 + 885 Gaps:10 100.00 887 82.53 0.0 respiratory burst oxidase homolog protein B-like
blastp_kegg lcl|tcc:TCM_026646 1 885 + 885 Gaps:8 100.00 889 83.13 0.0 Respiratory burst oxidase B
blastp_kegg lcl|gmx:100812342 1 885 + 885 Gaps:10 100.00 885 82.26 0.0 respiratory burst oxidase homolog protein B-like
blastp_kegg lcl|pvu:PHAVU_007G196800g 1 885 + 885 Gaps:13 100.00 890 81.35 0.0 hypothetical protein
blastp_kegg lcl|cmo:103492165 1 885 + 885 Gaps:14 100.00 889 81.21 0.0 respiratory burst oxidase homolog protein B
blastp_kegg lcl|mtr:MTR_1g083290 1 885 + 885 Gaps:12 100.00 885 82.82 0.0 Respiratory burst oxidase-like protein
blastp_pdb 3a8r_B 120 294 + 175 none 97.77 179 64.00 2e-72 mol:protein length:179 Putative uncharacterized protein
blastp_pdb 3a8r_A 120 294 + 175 none 97.77 179 64.00 2e-72 mol:protein length:179 Putative uncharacterized protein
blastp_pdb 3a1f_A 682 885 + 204 Gaps:30 100.00 186 37.10 6e-29 mol:protein length:186 Cytochrome b-245 heavy chain
blastp_uniprot_sprot sp|Q948T9|RBOHB_SOLTU 1 885 + 885 Gaps:20 100.00 867 80.05 0.0 Respiratory burst oxidase homolog protein B OS Solanum tuberosum GN RBOHB PE 1 SV 1
blastp_uniprot_sprot sp|Q2HXL0|RBOHC_SOLTU 12 885 + 874 Gaps:59 98.40 938 65.11 0.0 Respiratory burst oxidase homolog protein C OS Solanum tuberosum GN RBOHC PE 1 SV 2
blastp_uniprot_sprot sp|Q5ZAJ0|RBOHB_ORYSJ 27 885 + 859 Gaps:25 96.80 905 65.98 0.0 Respiratory burst oxidase homolog protein B OS Oryza sativa subsp. japonica GN RBOHB PE 1 SV 1
blastp_uniprot_sprot sp|Q6J2K5|RBOHB_ORYSI 27 885 + 859 Gaps:25 96.80 905 65.98 0.0 Respiratory burst oxidase homolog protein B OS Oryza sativa subsp. indica GN RBOHB PE 2 SV 1
blastp_uniprot_sprot sp|Q9SBI0|RBOHB_ARATH 34 885 + 852 Gaps:34 98.46 843 70.36 0.0 Respiratory burst oxidase homolog protein B OS Arabidopsis thaliana GN RBOHB PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIJ0|RBOHD_ARATH 7 885 + 879 Gaps:50 97.83 921 64.37 0.0 Respiratory burst oxidase homolog protein D OS Arabidopsis thaliana GN RBOHD PE 1 SV 1
blastp_uniprot_sprot sp|O81210|RBOHC_ARATH 18 885 + 868 Gaps:30 98.56 905 62.67 0.0 Respiratory burst oxidase homolog protein C OS Arabidopsis thaliana GN RBOHC PE 2 SV 2
blastp_uniprot_sprot sp|Q2HXK9|RBOHD_SOLTU 34 885 + 852 Gaps:22 99.07 858 63.29 0.0 Respiratory burst oxidase homolog protein D OS Solanum tuberosum GN RBOHD PE 1 SV 2
blastp_uniprot_sprot sp|O81209|RBOHA_ARATH 38 885 + 848 Gaps:30 96.67 902 59.63 0.0 Respiratory burst oxidase homolog protein A OS Arabidopsis thaliana GN RBOHA PE 2 SV 2
blastp_uniprot_sprot sp|Q9SW17|RBOHG_ARATH 105 885 + 781 Gaps:20 91.99 849 60.95 0.0 Putative respiratory burst oxidase homolog protein G OS Arabidopsis thaliana GN RBOHG PE 2 SV 2
rpsblast_cdd gnl|CDD|203841 698 867 + 170 Gaps:29 100.00 149 47.65 8e-47 pfam08030 NAD_binding_6 Ferric reductase NAD binding domain.
rpsblast_cdd gnl|CDD|203934 120 214 + 95 Gaps:1 100.00 96 67.71 9e-44 pfam08414 NADPH_Ox Respiratory burst NADPH oxidase. This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N-terminus of an EF-hand (pfam00036) which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants.
rpsblast_cdd gnl|CDD|99783 578 798 + 221 Gaps:46 88.10 210 34.05 8e-37 cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes but are now also implicated in cell signaling and metabolism. NOX has a 6-alpha helix heme-binding transmembrane domain fused to a flavoprotein with the nucleotide binding domain located in the cytoplasm. Duox enzymes link a peroxidase domain to the NOX domain via a single transmembrane and EF-hand Ca2+ binding sites. The flavoprotein module has a ferredoxin like FAD/NADPH binding domain. In classical phagocytic NOX2 electron transfer occurs from NADPH to FAD to the heme of cytb to oxygen leading to superoxide formation..
rpsblast_cdd gnl|CDD|149226 576 692 + 117 Gaps:19 97.09 103 48.00 5e-33 pfam08022 FAD_binding_8 FAD-binding domain.
rpsblast_cdd gnl|CDD|178437 465 720 + 256 Gaps:41 30.61 722 35.75 3e-28 PLN02844 PLN02844 oxidoreductase/ferric-chelate reductase.
rpsblast_cdd gnl|CDD|177929 505 721 + 217 Gaps:37 26.50 702 32.80 8e-22 PLN02292 PLN02292 ferric-chelate reductase.
rpsblast_cdd gnl|CDD|178238 479 721 + 243 Gaps:49 28.61 699 35.50 9e-22 PLN02631 PLN02631 ferric-chelate reductase.

36 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 575 690 116 SSF63380 none none IPR017938
Phobius 517 537 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 356 419 64 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 698 867 170 PF08030 none Ferric reductase NAD binding domain IPR013121
Pfam 375 531 157 PF01794 none Ferric reductase like transmembrane component IPR013130
ProSiteProfiles 255 290 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Pfam 116 214 99 PF08414 none Respiratory burst NADPH oxidase IPR013623
Gene3D 699 884 186 G3DSA:3.40.50.80 none none none
SMART 215 243 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 259 287 29 SM00054 none EF-hand, calcium binding motif IPR002048
Phobius 1 335 335 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 476 497 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 571 694 124 PS51384 none Ferredoxin reductase-type FAD binding domain profile. IPR017927
ProSiteProfiles 211 246 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Phobius 567 699 133 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 549 566 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 116 885 770 PTHR11972 none none none
Phobius 420 438 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 336 355 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 224 236 13 PS00018 none EF-hand calcium-binding domain. IPR018247
PRINTS 680 693 14 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
PRINTS 421 439 19 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
PRINTS 514 534 21 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
PRINTS 703 720 18 PR00466 none Cytochrome B-245 heavy chain signature IPR000778
SUPERFAMILY 138 288 151 SSF47473 none none none
Phobius 439 475 37 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 116 885 770 PTHR11972:SF57 none none IPR029654
Phobius 538 548 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 575 691 117 PF08022 none FAD-binding domain IPR013112
Phobius 718 885 168 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

4 Localization

Analysis Start End Length
TMHMM 518 540 22
TMHMM 336 355 19
TMHMM 476 498 22
TMHMM 700 717 17

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting