Protein : Qrob_P0489090.2 Q. robur
Protein Identifier  ? Qrob_P0489090.2 Organism . Name  Quercus robur
Score  61.2 Score Type  egn
Protein Description  (M=6) PTHR11730:SF17 - AMMONIUM TRANSPORTER MEP2 (PTHR11730:SF17) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 199  
Kegg Orthology  K03320
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008519 ammonium transmembrane transporter activity Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.
GO:0015696 ammonium transport The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.
GO:0072488 ammonium transmembrane transport The directed movement of ammonium across a membrane by means of some agent such as a transporter or pore. Ammonium is the cation NH4+.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_004244 3 197 + 195 Gaps:55 40.33 610 61.79 4e-83 Ammonium transporter 2
blastp_kegg lcl|cit:102614263 3 197 + 195 Gaps:55 53.83 457 60.98 4e-83 ammonium transporter 3 member 1-like
blastp_kegg lcl|sly:101266264 3 197 + 195 Gaps:55 53.95 456 56.10 1e-82 ammonium transporter 3 member 1-like
blastp_kegg lcl|fve:101299200 3 197 + 195 Gaps:55 52.56 468 58.94 4e-82 ammonium transporter 3 member 1-like
blastp_kegg lcl|pper:PRUPE_ppa005235mg 3 197 + 195 Gaps:55 52.23 471 60.57 4e-82 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0991000 3 197 + 195 Gaps:55 51.36 479 61.38 5e-82 ammonium transporter putative
blastp_kegg lcl|sot:102588034 3 197 + 195 Gaps:55 53.95 456 55.69 6e-82 ammonium transporter 3 member 1-like
blastp_kegg lcl|mdm:103448922 3 197 + 195 Gaps:55 52.23 471 60.57 1e-81 ammonium transporter 3 member 3-like
blastp_kegg lcl|pop:POPTR_0002s04780g 3 197 + 195 Gaps:55 54.91 448 62.60 1e-81 POPTRDRAFT_754260 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s05980g 3 197 + 195 Gaps:55 53.48 460 56.91 2e-81 POPTRDRAFT_806873 hypothetical protein
blastp_pdb 1xqf_A 3 194 + 192 Gaps:59 53.35 418 34.08 1e-19 mol:protein length:418 Probable ammonium transporter
blastp_pdb 1xqe_A 3 194 + 192 Gaps:59 53.35 418 34.08 1e-19 mol:protein length:418 Probable ammonium transporter
blastp_pdb 2now_A 3 194 + 192 Gaps:59 52.59 424 34.08 1e-19 mol:protein length:424 Ammonia channel
blastp_pdb 3c1g_A 3 194 + 192 Gaps:59 52.59 424 34.08 1e-19 mol:protein length:424 Ammonia channel
blastp_pdb 2nop_A 3 194 + 192 Gaps:59 52.59 424 34.08 1e-19 mol:protein length:424 Ammonia channel
blastp_pdb 2nmr_A 3 194 + 192 Gaps:59 52.59 424 34.08 1e-19 mol:protein length:424 Ammonia channel
blastp_pdb 2npd_A 3 194 + 192 Gaps:59 52.59 424 34.08 1e-19 mol:protein length:424 Ammonia channel
blastp_pdb 2ns1_A 3 194 + 192 Gaps:59 54.13 412 34.08 1e-19 mol:protein length:412 Ammonia channel
blastp_pdb 2npc_A 3 194 + 192 Gaps:59 52.59 424 34.08 1e-19 mol:protein length:424 Ammonia channel
blastp_pdb 3c1h_A 3 194 + 192 Gaps:59 52.59 424 34.08 1e-19 mol:protein length:424 Ammonia channel
blastp_uniprot_sprot sp|Q84KJ6|AMT31_ORYSJ 3 197 + 195 Gaps:55 47.79 498 51.26 5e-63 Ammonium transporter 3 member 1 OS Oryza sativa subsp. japonica GN AMT3-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q69T29|AMT33_ORYSJ 3 197 + 195 Gaps:54 49.38 480 49.37 2e-58 Ammonium transporter 3 member 3 OS Oryza sativa subsp. japonica GN AMT3-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q10CV4|AMT41_ORYSJ 3 197 + 195 Gaps:32 73.24 299 52.97 6e-57 Putative ammonium transporter 4 member 1 OS Oryza sativa subsp. japonica GN AMT4-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8S230|AMT22_ORYSJ 3 197 + 195 Gaps:65 47.11 501 49.15 2e-55 Ammonium transporter 2 member 2 OS Oryza sativa subsp. japonica GN AMT2-2 PE 2 SV 2
blastp_uniprot_sprot sp|Q851M9|AMT32_ORYSJ 3 197 + 195 Gaps:56 49.48 479 48.10 3e-51 Ammonium transporter 3 member 2 OS Oryza sativa subsp. japonica GN AMT3-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M6N7|AMT2_ARATH 3 197 + 195 Gaps:56 49.89 475 48.95 3e-50 Ammonium transporter 2 OS Arabidopsis thaliana GN AMT2 PE 1 SV 2
blastp_uniprot_sprot sp|Q84KJ7|AMT21_ORYSJ 3 197 + 195 Gaps:51 48.56 486 47.03 8e-48 Ammonium transporter 2 member 1 OS Oryza sativa subsp. japonica GN AMT2-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S233|AMT23_ORYSJ 3 197 + 195 Gaps:55 47.48 497 46.61 4e-45 Ammonium transporter 2 member 3 OS Oryza sativa subsp. japonica GN AMT2-3 PE 2 SV 1
blastp_uniprot_sprot sp|O66515|AMT_AQUAE 9 196 + 188 Gaps:61 51.30 423 36.41 2e-20 Ammonia channel OS Aquifex aeolicus (strain VF5) GN amt PE 1 SV 1
blastp_uniprot_sprot sp|P69681|AMTB_ECOLI 3 194 + 192 Gaps:59 52.10 428 34.08 6e-19 Ammonia channel OS Escherichia coli (strain K12) GN amtB PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 3 197 195 PTHR11730:SF17 none none none
SUPERFAMILY 2 129 128 SSF111352 none none IPR024041
Phobius 37 47 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 100 141 42 G3DSA:1.10.3430.10 none none IPR029020
Gene3D 3 99 97 G3DSA:1.10.3430.10 none none IPR029020
PANTHER 3 197 195 PTHR11730 none none IPR001905
Phobius 19 36 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 18 18 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 48 69 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 3 99 97 PF00909 none Ammonium Transporter Family IPR024041
Pfam 100 194 95 PF00909 none Ammonium Transporter Family IPR024041
Phobius 70 198 129 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5

0 Targeting