8 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0008270 | zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
GO:0030170 | pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
GO:0005739 | mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
GO:0006535 | cysteine biosynthetic process from serine | The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine. |
GO:0004124 | cysteine synthase activity | Catalysis of the reaction: O3-acetyl-L-serine + hydrogen sulfide = L-cysteine + acetate. |
GO:0006520 | cellular amino acid metabolic process | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. |
GO:0019499 | cyanide metabolic process | The chemical reactions and pathways involving cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration, reacting with the ferric form of cytochrome aa3 and thus blocking the electron transport chain. |
GO:0050017 | L-3-cyanoalanine synthase activity | Catalysis of the reaction: L-cysteine + HCN = sulfide + L-3-cyanoalanine. |
44 Blast
14 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
ProSitePatterns | 497 | 515 | 19 | PS00901 | none | Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. | IPR001216 |
Coils | 238 | 259 | 22 | Coil | none | none | none |
Gene3D | 586 | 766 | 181 | G3DSA:3.40.50.1100 | none | none | none |
Phobius | 1 | 326 | 326 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
SMART | 153 | 180 | 28 | SM00575 | none | plant mutator transposase zinc finger | IPR006564 |
SUPERFAMILY | 469 | 764 | 296 | SSF53686 | none | none | IPR001926 |
ProSiteProfiles | 142 | 178 | 37 | PS50966 | none | Zinc finger SWIM-type profile. | IPR007527 |
ProSitePatterns | 499 | 512 | 14 | PS00165 | none | Serine/threonine dehydratases pyridoxal-phosphate attachment site. | IPR000634 |
Phobius | 347 | 784 | 438 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
PANTHER | 474 | 779 | 306 | PTHR10314 | none | none | none |
PANTHER | 474 | 779 | 306 | PTHR10314:SF80 | "KEGG:00460+4.4.1.9";signature_desc=BIFUNCTIONAL L-3-CYANOALANINE SYNTHASE/CYSTEINE SYNTHASE C1, MITOCHONDRIAL (PTHR10314:SF80) | none | IPR031111 |
Gene3D | 502 | 585 | 84 | G3DSA:3.40.50.1100 | none | none | none |
Phobius | 327 | 346 | 20 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
Pfam | 472 | 757 | 286 | PF00291 | none | Pyridoxal-phosphate dependent enzyme | IPR001926 |
5 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2003_QTL11_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1CGP2H_273 | v_15801_330 | 27,16 | 4,16 | 48,16 | lod | 2,3 | 5,1 |
Bourran2_2004_QTL12_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1BDO6G_250 | s_1A83AM_496 | 34,31 | 9,31 | 44,31 | lod | 3,6 | 7,6 |
Bourran2_2015_nSecLBD_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 35,81 | 34,88 | 37,45 | lod | 4.4 | 10.4 |
PM_1999_QTL15_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1CGP2H_273 | v_15801_330 | 27,16 | 9,16 | 47,16 | lod | 3,6 | 6,5 |
Bourran1_2003_QTL5_peak_Bud_burst_3P | Qrob_Chr09 | 9 | s_1ATM17_504 | s_1AYZFM_899 | 29,81 | 19,81 | 41,81 | lod | 3,3 | 8,9 |