Protein : Qrob_P0468540.2 Q. robur
Protein Identifier  ? Qrob_P0468540.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) 3.4.16.2 - Lysosomal Pro-Xaa carboxypeptidase. Code Enzyme  EC:3.4.16.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 375  
Kegg Orthology  K01285
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0008236 serine-type peptidase activity Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102628854 1 371 + 371 Gaps:41 81.67 502 57.80 9e-163 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|gmx:100806486 2 370 + 369 Gaps:41 80.16 509 57.60 5e-162 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|tcc:TCM_046934 1 371 + 371 Gaps:44 81.39 505 58.15 5e-161 Serine carboxypeptidase S28 family protein
blastp_kegg lcl|pvu:PHAVU_005G129100g 2 370 + 369 Gaps:43 80.23 511 56.34 9e-159 hypothetical protein
blastp_kegg lcl|vvi:100253310 7 371 + 365 Gaps:41 79.92 503 57.46 1e-157 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|vvi:100265353 9 371 + 363 Gaps:45 79.52 503 58.75 7e-157 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|vvi:100243061 9 371 + 363 Gaps:45 76.86 510 58.16 1e-152 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|cic:CICLE_v10028401mg 42 371 + 330 Gaps:38 79.91 458 59.02 9e-152 hypothetical protein
blastp_kegg lcl|vvi:100244772 9 371 + 363 Gaps:43 79.60 505 56.22 3e-148 lysosomal Pro-X carboxypeptidase-like
blastp_kegg lcl|rcu:RCOM_0476300 7 371 + 365 Gaps:40 80.04 501 54.86 1e-145 Lysosomal Pro-X carboxypeptidase putative (EC:3.4.16.2)
blastp_pdb 3n2z_B 49 371 + 323 Gaps:66 82.74 446 30.62 2e-54 mol:protein length:446 Lysosomal Pro-X carboxypeptidase
blastp_pdb 3n0t_D 51 372 + 322 Gaps:68 79.74 469 28.07 6e-37 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3n0t_C 51 372 + 322 Gaps:68 79.74 469 28.07 6e-37 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3n0t_B 51 372 + 322 Gaps:68 79.74 469 28.07 6e-37 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3n0t_A 51 372 + 322 Gaps:68 79.74 469 28.07 6e-37 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3jyh_D 51 372 + 322 Gaps:68 79.74 469 28.07 6e-37 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3jyh_C 51 372 + 322 Gaps:68 79.74 469 28.07 6e-37 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3jyh_B 51 372 + 322 Gaps:68 79.74 469 28.07 6e-37 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3jyh_A 51 372 + 322 Gaps:68 79.74 469 28.07 6e-37 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_uniprot_sprot sp|Q5RBU7|PCP_PONAB 39 371 + 333 Gaps:68 76.01 496 30.24 9e-54 Lysosomal Pro-X carboxypeptidase OS Pongo abelii GN PRCP PE 2 SV 1
blastp_uniprot_sprot sp|P42785|PCP_HUMAN 39 371 + 333 Gaps:68 76.01 496 30.24 1e-53 Lysosomal Pro-X carboxypeptidase OS Homo sapiens GN PRCP PE 1 SV 1
blastp_uniprot_sprot sp|Q7TMR0|PCP_MOUSE 51 371 + 321 Gaps:60 74.75 491 31.61 1e-52 Lysosomal Pro-X carboxypeptidase OS Mus musculus GN Prcp PE 2 SV 2
blastp_uniprot_sprot sp|Q2TA14|PCP_BOVIN 55 371 + 317 Gaps:61 72.95 499 31.32 3e-51 Lysosomal Pro-X carboxypeptidase OS Bos taurus GN PRCP PE 2 SV 1
blastp_uniprot_sprot sp|Q9EPB1|DPP2_RAT 41 372 + 332 Gaps:75 76.60 500 29.77 2e-38 Dipeptidyl peptidase 2 OS Rattus norvegicus GN Dpp7 PE 1 SV 1
blastp_uniprot_sprot sp|Q9UHL4|DPP2_HUMAN 51 372 + 322 Gaps:68 76.02 492 28.07 3e-36 Dipeptidyl peptidase 2 OS Homo sapiens GN DPP7 PE 1 SV 3
blastp_uniprot_sprot sp|Q9ET22|DPP2_MOUSE 50 372 + 323 Gaps:82 74.11 506 28.27 9e-35 Dipeptidyl peptidase 2 OS Mus musculus GN Dpp7 PE 2 SV 2
blastp_uniprot_sprot sp|P34676|PCP5_CAEEL 33 285 + 253 Gaps:61 54.83 507 35.97 8e-26 Prolyl carboxy peptidase like protein 5 OS Caenorhabditis elegans GN pcp-5 PE 1 SV 1
blastp_uniprot_sprot sp|P34610|PCP1_CAEEL 48 207 + 160 Gaps:16 28.32 565 41.25 3e-23 Putative serine protease pcp-1 OS Caenorhabditis elegans GN pcp-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9NQE7|TSSP_HUMAN 52 286 + 235 Gaps:42 49.61 514 32.55 1e-21 Thymus-specific serine protease OS Homo sapiens GN PRSS16 PE 2 SV 2
rpsblast_cdd gnl|CDD|114307 58 370 + 313 Gaps:78 85.22 433 26.02 2e-38 pfam05577 Peptidase_S28 Serine carboxypeptidase S28. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase dipeptidyl-peptidase II and thymus-specific serine peptidase.

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 9 370 362 PTHR11010:SF31 none none none
Pfam 58 319 262 PF05577 none Serine carboxypeptidase S28 IPR008758
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 9 370 362 PTHR11010 none none IPR008758
SUPERFAMILY 78 226 149 SSF53474 none none IPR029058
Phobius 23 374 352 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 18 22 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 55 256 202 G3DSA:3.40.50.1820 none none IPR029058

4 Localization

Analysis Start End Length
SignalP_EUK 1 22 21
TMHMM 7 26 19
SignalP_GRAM_POSITIVE 1 22 21
SignalP_GRAM_NEGATIVE 1 22 21

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting