Protein : Qrob_P0466530.2 Q. robur
Protein Identifier  ? Qrob_P0466530.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR10809//PTHR10809:SF44 - VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 266  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005789 endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_005G107900g 1 265 + 265 Gaps:3 100.00 268 78.73 7e-148 hypothetical protein
blastp_kegg lcl|gmx:100816998 1 265 + 265 Gaps:4 100.00 263 79.85 9e-138 vesicle-associated protein 4-2-like
blastp_kegg lcl|pxb:103942110 1 265 + 265 Gaps:3 100.00 268 76.12 6e-133 vesicle-associated protein 4-2-like
blastp_kegg lcl|tcc:TCM_007939 1 264 + 264 Gaps:5 99.63 270 80.30 8e-133 Vesicle-associated protein 4-2
blastp_kegg lcl|pvu:PHAVU_011G111000g 1 265 + 265 Gaps:1 100.00 264 81.06 1e-132 hypothetical protein
blastp_kegg lcl|gmx:100820576 1 265 + 265 Gaps:6 100.00 271 79.70 1e-131 vesicle-associated protein 4-2-like
blastp_kegg lcl|vvi:100244149 1 265 + 265 Gaps:8 100.00 259 81.08 2e-131 vesicle-associated protein 4-2-like
blastp_kegg lcl|gmx:100794120 1 265 + 265 none 100.00 265 76.60 7e-130 vesicle-associated protein 4-2-like
blastp_kegg lcl|cic:CICLE_v10016218mg 1 265 + 265 Gaps:11 100.00 276 79.71 2e-128 hypothetical protein
blastp_kegg lcl|cit:102611934 1 265 + 265 Gaps:11 100.00 276 79.71 2e-128 vesicle-associated protein 4-2-like
blastp_uniprot_sprot sp|Q8VYN2|VAP42_ARATH 1 265 + 265 Gaps:30 100.00 295 63.73 7e-125 Vesicle-associated protein 4-2 OS Arabidopsis thaliana GN PVA42 PE 1 SV 1
blastp_uniprot_sprot sp|Q1ECE0|VAP41_ARATH 14 265 + 252 Gaps:5 93.61 266 69.88 1e-106 Vesicle-associated protein 4-1 OS Arabidopsis thaliana GN PVA41 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LPQ7|VAP43_ARATH 1 264 + 264 Gaps:32 99.65 287 55.59 1e-95 Vesicle-associated protein 4-3 OS Arabidopsis thaliana GN PVA43 PE 2 SV 1
blastp_uniprot_sprot sp|Q84WW5|VAP13_ARATH 85 209 + 125 Gaps:8 52.30 239 32.00 2e-09 Vesicle-associated protein 1-3 OS Arabidopsis thaliana GN PVA13 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SHC8|VAP12_ARATH 78 209 + 132 Gaps:9 54.81 239 33.59 1e-08 Vesicle-associated protein 1-2 OS Arabidopsis thaliana GN PVA12 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VZ95|VAP11_ARATH 86 209 + 124 Gaps:8 48.44 256 33.06 5e-08 Vesicle-associated protein 1-1 OS Arabidopsis thaliana GN PVA11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 78 212 + 135 Gaps:21 44.83 571 33.20 1e-06 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
blastp_uniprot_sprot sp|B9DHD7|VAP22_ARATH 86 208 + 123 Gaps:12 31.35 386 36.36 2e-06 Vesicle-associated protein 2-2 OS Arabidopsis thaliana GN PVA22 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LVU1|VAP21_ARATH 84 201 + 118 Gaps:7 53.18 220 29.91 5e-06 Vesicle-associated protein 2-1 OS Arabidopsis thaliana GN PVA21 PE 2 SV 1
rpsblast_cdd gnl|CDD|201362 78 190 + 113 Gaps:5 99.08 109 33.33 2e-21 pfam00635 Motile_Sperm MSP (Major sperm protein) domain. Major sperm proteins are involved in sperm motility. These proteins oligomerise to form filaments. This family contains many other proteins.
rpsblast_kog gnl|CDD|35660 70 264 + 195 Gaps:31 100.00 218 32.11 3e-22 KOG0439 KOG0439 KOG0439 VAMP-associated protein involved in inositol metabolism [Intracellular trafficking secretion and vesicular transport].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 73 196 124 G3DSA:2.60.40.360 none none IPR008962
PANTHER 52 265 214 PTHR10809 "Reactome:REACT_22258";signature_desc=VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN none IPR016763
Pfam 78 188 111 PF00635 none MSP (Major sperm protein) domain IPR000535
ProSiteProfiles 77 199 123 PS50202 none Major sperm protein (MSP) domain profile. IPR000535
SUPERFAMILY 66 209 144 SSF49354 none none IPR008962
PANTHER 52 265 214 PTHR10809:SF44 none none none

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting