Protein : Qrob_P0455710.2 Q. robur
Protein Identifier  ? Qrob_P0455710.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=3) PTHR10231//PTHR10231:SF25 - NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 108  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0000139 Golgi membrane The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
GO:0005351 sugar:proton symporter activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in).
GO:0008643 carbohydrate transport The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100265191 3 106 + 104 none 26.80 388 87.50 5e-56 probable UDP-sugar transporter protein SLC35A5-like
blastp_kegg lcl|pop:POPTR_0008s07700g 3 106 + 104 none 25.49 408 83.65 7e-55 POPTRDRAFT_765655 hypothetical protein
blastp_kegg lcl|pop:POPTR_0010s18780g 3 106 + 104 none 25.81 403 83.65 2e-53 POPTRDRAFT_822353 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10011853mg 3 106 + 104 none 32.81 317 78.85 2e-52 hypothetical protein
blastp_kegg lcl|cit:102630769 3 106 + 104 none 25.81 403 78.85 2e-51 CMP-sialic acid transporter 3-like
blastp_kegg lcl|atr:s00066p00054390 3 106 + 104 Gaps:1 25.69 401 82.52 4e-51 AMTR_s00066p00054390 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1077250 3 106 + 104 none 26.00 400 80.77 2e-50 UDP-galactose/UDP-N-acetylglucosamine transporter putative
blastp_kegg lcl|sot:102579001 3 107 + 105 Gaps:1 25.74 404 80.77 3e-50 CMP-sialic acid transporter 3-like
blastp_kegg lcl|sly:101257327 3 107 + 105 Gaps:1 25.55 407 79.81 6e-50 CMP-sialic acid transporter 3-like
blastp_kegg lcl|tcc:TCM_021551 3 106 + 104 Gaps:1 25.50 404 80.58 7e-50 Nucleotide-sugar transporter family protein isoform 1
blastp_uniprot_sprot sp|Q8GY97|CSTR2_ARATH 3 107 + 105 Gaps:1 25.62 406 75.00 3e-47 CMP-sialic acid transporter 2 OS Arabidopsis thaliana GN At2g43240 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5H6|CSTR3_ARATH 3 107 + 105 Gaps:2 25.93 405 69.52 2e-41 CMP-sialic acid transporter 3 OS Arabidopsis thaliana GN UTR6 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LGE9|CSTR1_ARATH 3 60 + 58 none 17.06 340 39.66 8e-07 CMP-sialic acid transporter 1 OS Arabidopsis thaliana GN At5g41760 PE 2 SV 1
rpsblast_kog gnl|CDD|37445 3 71 + 69 Gaps:2 19.42 345 37.31 4e-12 KOG2234 KOG2234 KOG2234 Predicted UDP-galactose transporter [Carbohydrate transport and metabolism].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 45 107 63 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 20 44 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 19 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 3 103 101 PTHR10231 none none IPR007271
PANTHER 3 103 101 PTHR10231:SF25 none none none

1 Localization

Analysis Start End Length
TMHMM 21 43 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting