Protein : Qrob_P0447070.2 Q. robur
Protein Identifier  ? Qrob_P0447070.2 Organism . Name  Quercus robur
Score  16.3 Score Type  egn
Protein Description  (M=40) 2.4.1.12 - Cellulose synthase (UDP-forming). Code Enzyme  EC:2.4.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 207  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
GO:0016760 cellulose synthase (UDP-forming) activity Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103318701 1 203 + 203 Gaps:2 27.54 737 70.44 2e-98 cellulose synthase-like protein E6
blastp_kegg lcl|pper:PRUPE_ppa001952mg 1 203 + 203 Gaps:2 27.54 737 70.44 4e-97 hypothetical protein
blastp_kegg lcl|fve:101293766 13 203 + 191 none 25.78 741 68.06 4e-91 cellulose synthase-like protein E6-like
blastp_kegg lcl|vvi:100260085 5 203 + 199 none 27.04 736 66.33 5e-89 cellulose synthase-like protein E6-like
blastp_kegg lcl|pxb:103940710 1 203 + 203 Gaps:6 25.07 1472 65.31 2e-86 uncharacterized LOC103940710
blastp_kegg lcl|sot:102591207 1 203 + 203 Gaps:6 25.06 794 65.83 4e-86 cellulose synthase-like protein E6-like
blastp_kegg lcl|sot:102591531 3 203 + 201 Gaps:2 26.14 769 64.18 2e-85 cellulose synthase-like protein E6-like
blastp_kegg lcl|mdm:103425728 1 184 + 184 Gaps:6 87.25 204 64.04 3e-83 cellulose synthase-like protein E2
blastp_kegg lcl|pper:PRUPE_ppa001941mg 1 197 + 197 Gaps:5 26.02 738 62.50 6e-83 hypothetical protein
blastp_kegg lcl|pmum:103318715 1 197 + 197 Gaps:5 26.02 738 61.98 2e-82 cellulose synthase-like protein E1
blastp_uniprot_sprot sp|Q0DXZ1|CSLE2_ORYSJ 14 203 + 190 Gaps:5 26.17 745 57.95 7e-66 Cellulose synthase-like protein E2 OS Oryza sativa subsp. japonica GN CSLE2 PE 2 SV 1
blastp_uniprot_sprot sp|Q651X7|CSLE1_ORYSJ 14 203 + 190 Gaps:1 25.64 737 54.50 1e-63 Cellulose synthase-like protein E1 OS Oryza sativa subsp. japonica GN CSLE1 PE 2 SV 2
blastp_uniprot_sprot sp|Q651X6|CSLE6_ORYSJ 15 203 + 189 Gaps:1 25.82 728 54.26 4e-63 Cellulose synthase-like protein E6 OS Oryza sativa subsp. japonica GN CSLE6 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZK9|CSLE1_ARATH 14 192 + 179 Gaps:16 24.83 729 54.70 1e-60 Cellulose synthase-like protein E1 OS Arabidopsis thaliana GN CSLE1 PE 1 SV 1
blastp_uniprot_sprot sp|O23386|CSLB6_ARATH 28 203 + 176 Gaps:8 22.72 757 41.86 6e-37 Cellulose synthase-like protein B6 OS Arabidopsis thaliana GN CSLB6 PE 2 SV 2
blastp_uniprot_sprot sp|O80898|CSLB1_ARATH 34 203 + 170 Gaps:3 22.59 757 41.52 1e-35 Cellulose synthase-like protein B1 OS Arabidopsis thaliana GN CSLB1 PE 2 SV 2
blastp_uniprot_sprot sp|O80899|CSLB2_ARATH 44 184 + 141 Gaps:5 17.97 757 47.06 4e-35 Cellulose synthase-like protein B2 OS Arabidopsis thaliana GN CSLB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WVN5|CSLG3_ARATH 67 188 + 122 Gaps:1 16.11 751 48.76 8e-35 Cellulose synthase-like protein G3 OS Arabidopsis thaliana GN CSLG3 PE 2 SV 2
blastp_uniprot_sprot sp|Q8RX83|CSLB3_ARATH 28 184 + 157 Gaps:5 20.13 755 45.39 1e-34 Cellulose synthase-like protein B3 OS Arabidopsis thaliana GN CSLB3 PE 2 SV 1
blastp_uniprot_sprot sp|Q84M43|CESA2_ORYSJ 24 189 + 166 Gaps:8 15.66 1073 39.88 4e-34 Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA2 PE 2 SV 1
rpsblast_cdd gnl|CDD|177842 44 203 + 160 Gaps:6 20.63 756 43.59 1e-37 PLN02190 PLN02190 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|178481 63 185 + 123 Gaps:1 16.89 734 47.58 1e-37 PLN02893 PLN02893 Cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|178244 24 189 + 166 Gaps:8 15.57 1079 41.67 5e-35 PLN02638 PLN02638 cellulose synthase A (UDP-forming) catalytic subunit.
rpsblast_cdd gnl|CDD|178022 27 189 + 163 Gaps:8 15.21 1085 38.18 3e-34 PLN02400 PLN02400 cellulose synthase.
rpsblast_cdd gnl|CDD|178055 1 189 + 189 Gaps:12 17.09 1094 38.50 1e-33 PLN02436 PLN02436 cellulose synthase A.
rpsblast_cdd gnl|CDD|177841 60 203 + 144 Gaps:9 14.71 1040 41.83 6e-33 PLN02189 PLN02189 cellulose synthase.
rpsblast_cdd gnl|CDD|177846 27 189 + 163 Gaps:8 16.89 977 37.58 1e-32 PLN02195 PLN02195 cellulose synthase A.
rpsblast_cdd gnl|CDD|178503 60 203 + 144 Gaps:9 14.66 1044 40.52 2e-32 PLN02915 PLN02915 cellulose synthase A [UDP-forming] catalytic subunit.
rpsblast_cdd gnl|CDD|177890 27 189 + 163 Gaps:13 14.98 1135 34.71 2e-32 PLN02248 PLN02248 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|146277 105 189 + 85 none 11.87 716 52.94 1e-30 pfam03552 Cellulose_synt Cellulose synthase. Cellulose an aggregate of unbranched polymers of beta-1 4-linked glucose residues is the major component of wood and thus paper and is synthesised by plants most algae some bacteria and fungi and even some animals. The genes that synthesise cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits' plant cellulose synthase (CesA) proteins are integral membrane proteins approximately 1 000 amino acids in length. There are a number of highly conserved residues including several motifs shown to be necessary for processive glycosyltransferase activity.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 47 57 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 105 191 87 PF03552 none Cellulose synthase IPR005150
PANTHER 20 189 170 PTHR13301:SF27 none none none
PANTHER 20 189 170 PTHR13301 none none none
Phobius 58 76 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 25 46 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 77 206 130 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 24 24 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
TMHMM 23 45 22
TMHMM 58 77 19

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting