Protein : Qrob_P0446440.2 Q. robur
Protein Identifier  ? Qrob_P0446440.2 Organism . Name  Quercus robur
Score  64.2 Score Type  egn
Protein Description  (M=1) PTHR31692:SF5 - EXPANSIN-B1-RELATED (PTHR31692:SF5) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 266  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005576 extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO:0019953 sexual reproduction A reproduction process that creates a new organism by combining the genetic material of two organisms. It occurs both in eukaryotes and prokaryotes: in multicellular eukaryotic organisms, an individual is created anew; in prokaryotes, the initial cell has additional or transformed genetic material. In a process called genetic recombination, genetic material (DNA) originating from two different individuals (parents) join up so that homologous sequences are aligned with each other, and this is followed by exchange of genetic information. After the new recombinant chromosome is formed, it is passed on to progeny.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1175460 14 265 + 252 Gaps:5 99.23 259 80.16 2e-147 Beta-expansin 3 precursor putative
blastp_kegg lcl|cmo:103490518 5 264 + 260 Gaps:5 98.51 269 77.36 1e-145 expansin-B3
blastp_kegg lcl|cit:102618203 16 265 + 250 Gaps:4 94.78 268 79.53 3e-143 expansin-B3-like
blastp_kegg lcl|csv:101202998 15 264 + 250 Gaps:3 94.05 269 78.26 3e-143 expansin-B3-like
blastp_kegg lcl|pper:PRUPE_ppa010041mg 3 263 + 261 Gaps:2 98.87 266 76.81 6e-141 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s13780g 23 264 + 242 Gaps:7 95.04 262 79.92 7e-141 POPTRDRAFT_243090 Beta-expansin 1 precursor family protein
blastp_kegg lcl|tcc:TCM_008076 34 264 + 231 Gaps:3 87.97 266 83.76 9e-141 Expansin B1 BETA 1.5 isoform 2
blastp_kegg lcl|gmx:100810778 16 265 + 250 Gaps:3 93.26 267 75.50 1e-138 EXPB4 expansin-B3-like
blastp_kegg lcl|gmx:100804525 26 265 + 240 Gaps:2 89.89 267 77.08 2e-138 EXPB7 expansin-B3-like
blastp_kegg lcl|pvu:PHAVU_011G117500g 7 265 + 259 Gaps:5 98.50 266 72.52 3e-137 hypothetical protein
blastp_pdb 2hcz_X 40 264 + 225 Gaps:6 92.65 245 44.93 1e-56 mol:protein length:245 Beta-expansin 1a
blastp_pdb 1n10_B 40 260 + 221 Gaps:6 92.53 241 43.05 2e-52 mol:protein length:241 Pollen allergen Phl p 1
blastp_pdb 1n10_A 40 260 + 221 Gaps:6 92.53 241 43.05 2e-52 mol:protein length:241 Pollen allergen Phl p 1
blastp_pdb 2vxq_A 166 257 + 92 Gaps:4 93.75 96 33.33 3e-08 mol:protein length:96 POLLEN ALLERGEN PHL P 2
blastp_pdb 1whp_A 166 257 + 92 Gaps:4 93.75 96 33.33 3e-08 mol:protein length:96 ALLERGEN PHL P 2
blastp_pdb 1who_A 166 257 + 92 Gaps:4 93.75 96 33.33 3e-08 mol:protein length:96 ALLERGEN PHL P 2
blastp_pdb 1bmw_A 166 257 + 92 Gaps:4 93.75 96 33.33 3e-08 mol:protein length:96 POLLEN ALLERGEN PHL P2
blastp_uniprot_sprot sp|Q9M0I2|EXPB3_ARATH 14 265 + 252 Gaps:9 98.86 264 71.26 1e-138 Expansin-B3 OS Arabidopsis thaliana GN EXPB3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SKU2|EXPB1_ARATH 32 265 + 234 Gaps:4 87.82 271 73.95 8e-128 Expansin-B1 OS Arabidopsis thaliana GN EXPB1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7X6J9|EXB17_ORYSJ 37 263 + 227 Gaps:3 82.73 278 73.91 2e-123 Expansin-B17 OS Oryza sativa subsp. japonica GN EXPB17 PE 3 SV 2
blastp_uniprot_sprot sp|Q0DZ85|EXB16_ORYSJ 29 263 + 235 Gaps:3 87.50 272 71.01 3e-116 Expansin-B16 OS Oryza sativa subsp. japonica GN EXPB16 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SHY6|EXPB2_ARATH 37 263 + 227 Gaps:3 84.25 273 48.26 2e-75 Putative expansin-B2 OS Arabidopsis thaliana GN EXPB2 PE 3 SV 2
blastp_uniprot_sprot sp|Q7XT39|EXPB5_ORYSJ 40 263 + 224 Gaps:9 83.27 275 47.60 1e-67 Expansin-B5 OS Oryza sativa subsp. japonica GN EXPB5 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M203|EXPB5_ARATH 39 263 + 225 Gaps:4 85.23 264 46.67 3e-67 Expansin-B5 OS Arabidopsis thaliana GN EXPB5 PE 2 SV 2
blastp_uniprot_sprot sp|Q5W6Z9|EXB18_ORYSJ 40 263 + 224 Gaps:6 86.36 264 45.61 8e-64 Expansin-B18 OS Oryza sativa subsp. japonica GN EXPB18 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SHD1|EXPB4_ARATH 13 263 + 251 Gaps:6 98.46 259 42.35 6e-63 Expansin-B4 OS Arabidopsis thaliana GN EXPB4 PE 2 SV 1
blastp_uniprot_sprot sp|Q6H676|EXB11_ORYSJ 51 263 + 213 Gaps:8 74.32 292 46.54 4e-62 Expansin-B11 OS Oryza sativa subsp. japonica GN EXPB11 PE 2 SV 1
rpsblast_cdd gnl|CDD|178594 45 262 + 218 Gaps:12 87.45 247 36.57 1e-33 PLN03023 PLN03023 Expansin-like B1 Provisional.
rpsblast_cdd gnl|CDD|201746 167 248 + 82 none 100.00 82 48.78 4e-31 pfam01357 Pollen_allerg_1 Pollen allergen. This family contains allergens lol PI PII and PIII from Lolium perenne.
rpsblast_cdd gnl|CDD|165628 40 260 + 221 Gaps:26 89.47 247 36.65 3e-27 PLN00050 PLN00050 expansin A Provisional.

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 161 263 103 G3DSA:2.60.40.760 none none IPR007117
Phobius 30 265 236 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 15 25 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 26 160 135 G3DSA:2.40.40.10 none none IPR014733
SUPERFAMILY 39 164 126 SSF50685 none none IPR009009
Phobius 1 14 14 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 167 248 82 PF01357 none Pollen allergen IPR007117
SMART 76 155 80 SM00837 none Rare lipoprotein A (RlpA)-like double-psi beta-barrel IPR007112
Phobius 26 29 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PRINTS 57 75 19 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 80 98 19 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 206 220 15 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 148 164 17 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 39 54 16 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 245 259 15 PR01225 none Expansin/Lol pI family signature IPR007118
ProSiteProfiles 178 259 82 PS50843 none Expansin, Cellulose-binding-like domain profile. IPR007117
PANTHER 1 265 265 PTHR31692 none none none
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 165 259 95 SSF49590 none none IPR007117
PANTHER 1 265 265 PTHR31692:SF5 none none none
Pfam 78 155 78 PF03330 none Rare lipoprotein A (RlpA)-like double-psi beta-barrel IPR009009
ProSiteProfiles 58 165 108 PS50842 none Expansin, family-45 endoglucanase-like domain profile. IPR007112
PRINTS 137 152 16 PR00829 none Major pollen allergen Lol pI signature IPR005795
PRINTS 185 200 16 PR00829 none Major pollen allergen Lol pI signature IPR005795
PRINTS 235 252 18 PR00829 none Major pollen allergen Lol pI signature IPR005795
PRINTS 169 184 16 PR00829 none Major pollen allergen Lol pI signature IPR005795
PRINTS 78 89 12 PR00829 none Major pollen allergen Lol pI signature IPR005795
PRINTS 115 130 16 PR00829 none Major pollen allergen Lol pI signature IPR005795

1 Localization

Analysis Start End Length
SignalP_EUK 1 29 28

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting