Protein : Qrob_P0440220.2 Q. robur
Protein Identifier  ? Qrob_P0440220.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) K04802 - proliferating cell nuclear antigen Gene Prediction Quality  validated
Protein length 

Sequence

Length: 160  
Kegg Orthology  K04802
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0006275 regulation of DNA replication Any process that modulates the frequency, rate or extent of DNA replication.
GO:0030337 DNA polymerase processivity factor activity An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sot:102581875 55 159 + 105 none 39.77 264 88.57 1e-62 proliferating cell nuclear antigen-like
blastp_kegg lcl|sly:544248 55 159 + 105 none 39.77 264 88.57 1e-62 pcna proliferating cell nuclear antigen
blastp_kegg lcl|vvi:100248466 55 159 + 105 none 39.47 266 87.62 1e-62 proliferating cell nuclear antigen-like
blastp_kegg lcl|cmo:103502047 55 159 + 105 none 39.47 266 87.62 2e-62 proliferating cell nuclear antigen
blastp_kegg lcl|csv:101208473 55 159 + 105 none 39.47 266 87.62 2e-62 proliferating cell nuclear antigen-like
blastp_kegg lcl|gmx:548079 55 159 + 105 none 39.47 266 86.67 3e-62 PCNA proliferating cell nuclear antigen
blastp_kegg lcl|pmum:103320306 55 159 + 105 none 39.47 266 87.62 4e-62 proliferating cell nuclear antigen
blastp_kegg lcl|cam:101508463 55 159 + 105 none 39.47 266 86.67 5e-62 proliferating cell nuclear antigen-like
blastp_kegg lcl|pper:PRUPE_ppa010062mg 55 159 + 105 none 39.47 266 87.62 5e-62 hypothetical protein
blastp_kegg lcl|gmx:100817651 55 159 + 105 none 39.47 266 87.62 7e-62 proliferating cell nuclear antigen-like
blastp_pdb 2zvv_B 55 159 + 105 none 38.04 276 86.67 1e-62 mol:protein length:276 Proliferating cellular nuclear antigen 1
blastp_pdb 2zvv_A 55 159 + 105 none 38.04 276 86.67 1e-62 mol:protein length:276 Proliferating cellular nuclear antigen 1
blastp_pdb 2zvw_H 55 159 + 105 none 38.18 275 84.76 4e-62 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_G 55 159 + 105 none 38.18 275 84.76 4e-62 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_F 55 159 + 105 none 38.18 275 84.76 4e-62 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_E 55 159 + 105 none 38.18 275 84.76 4e-62 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_D 55 159 + 105 none 38.18 275 84.76 4e-62 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_C 55 159 + 105 none 38.18 275 84.76 4e-62 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_B 55 159 + 105 none 38.18 275 84.76 4e-62 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_A 55 159 + 105 none 38.18 275 84.76 4e-62 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_uniprot_sprot sp|O82134|PCNA_PEA 55 159 + 105 none 39.47 266 88.57 4e-64 Proliferating cell nuclear antigen OS Pisum sativum GN PCNA PE 2 SV 1
blastp_uniprot_sprot sp|O82797|PCNA_TOBAC 55 159 + 105 none 39.77 264 87.62 3e-63 Proliferating cell nuclear antigen OS Nicotiana tabacum GN PCNA PE 2 SV 1
blastp_uniprot_sprot sp|Q00268|PCNA1_DAUCA 55 159 + 105 none 39.77 264 85.71 1e-62 Proliferating cell nuclear antigen OS Daucus carota PE 3 SV 1
blastp_uniprot_sprot sp|Q9M7Q7|PCNA1_ARATH 55 159 + 105 none 39.92 263 86.67 2e-62 Proliferating cellular nuclear antigen 1 OS Arabidopsis thaliana GN PCNA PE 1 SV 2
blastp_uniprot_sprot sp|Q43266|PCNA_MAIZE 55 159 + 105 none 39.92 263 84.76 4e-62 Proliferating cell nuclear antigen OS Zea mays GN PCNA PE 2 SV 1
blastp_uniprot_sprot sp|Q43124|PCNA_BRANA 55 159 + 105 none 39.92 263 86.67 4e-62 Proliferating cell nuclear antigen OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZW35|PCNA2_ARATH 55 159 + 105 none 39.77 264 84.76 5e-62 Proliferating cell nuclear antigen 2 OS Arabidopsis thaliana GN PCNA2 PE 1 SV 1
blastp_uniprot_sprot sp|P17070|PCNA_ORYSJ 55 159 + 105 none 39.92 263 84.76 1e-61 Proliferating cell nuclear antigen OS Oryza sativa subsp. japonica GN Os02g0805200 PE 2 SV 2
blastp_uniprot_sprot sp|P24314|PCNA_CATRO 55 159 + 105 none 39.18 268 85.71 3e-61 Proliferating cell nuclear antigen OS Catharanthus roseus PE 2 SV 1
blastp_uniprot_sprot sp|Q00265|PCNA2_DAUCA 55 159 + 105 none 28.77 365 81.90 9e-59 Proliferating cell nuclear antigen large form OS Daucus carota PE 2 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 59 78 20 PR00339 none Proliferating cell nuclear antigen (cyclin) signature IPR000730
PRINTS 105 129 25 PR00339 none Proliferating cell nuclear antigen (cyclin) signature IPR000730
PRINTS 83 101 19 PR00339 none Proliferating cell nuclear antigen (cyclin) signature IPR000730
PANTHER 55 159 105 PTHR11352 none none IPR000730
ProSitePatterns 110 128 19 PS00293 none Proliferating cell nuclear antigen signature 2. IPR022659
SUPERFAMILY 56 157 102 SSF55979 none none none
Pfam 56 158 103 PF00705 none Proliferating cell nuclear antigen, N-terminal domain IPR022648
TIGRFAM 56 158 103 TIGR00590 none pcna: proliferating cell nuclear antigen (pcna) IPR000730
Gene3D 57 158 102 G3DSA:3.70.10.10 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting