7 GO Terms
| Identifier | Name | Description |
|---|---|---|
| GO:0005515 | protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
| GO:0016020 | membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| GO:0007165 | signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
| GO:0016310 | phosphorylation | The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide. |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). |
| GO:0004871 | signal transducer activity | Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response. |
| GO:0000155 | phosphorelay sensor kinase activity | Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response. |
35 Blast
27 Domain Motifs
| Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | 328 | 408 | 81 | SSF47384 | none | none | IPR009082 |
| SMART | 157 | 316 | 160 | SM00065 | none | Domain present in phytochromes and cGMP-specific phosphodiesterases. | IPR003018 |
| Phobius | 21 | 42 | 22 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
| Pfam | 454 | 584 | 131 | PF02518 | none | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | IPR003594 |
| PRINTS | 510 | 524 | 15 | PR00344 | none | Bacterial sensor protein C-terminal signature | IPR004358 |
| PRINTS | 545 | 563 | 19 | PR00344 | none | Bacterial sensor protein C-terminal signature | IPR004358 |
| PRINTS | 528 | 538 | 11 | PR00344 | none | Bacterial sensor protein C-terminal signature | IPR004358 |
| SMART | 342 | 407 | 66 | SM00388 | none | His Kinase A (phosphoacceptor) domain | IPR003661 |
| Phobius | 76 | 80 | 5 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
| Phobius | 81 | 108 | 28 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
| Phobius | 109 | 635 | 527 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
| ProSiteProfiles | 349 | 586 | 238 | PS50109 | "Reactome:REACT_1046" | Histidine kinase domain profile. | IPR005467 |
| SMART | 454 | 588 | 135 | SM00387 | none | Histidine kinase-like ATPases | IPR003594 |
| PANTHER | 507 | 600 | 94 | PTHR24423:SF365 | none | none | none |
| PANTHER | 3 | 488 | 486 | PTHR24423:SF365 | none | none | none |
| Phobius | 43 | 53 | 11 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
| SUPERFAMILY | 396 | 584 | 189 | SSF55874 | none | none | IPR003594 |
| Gene3D | 335 | 392 | 58 | G3DSA:1.10.287.130 | none | none | IPR003661 |
| Pfam | 343 | 407 | 65 | PF00512 | none | His Kinase A (phospho-acceptor) domain | IPR003661 |
| Phobius | 54 | 75 | 22 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
| Gene3D | 393 | 584 | 192 | G3DSA:3.30.565.10 | none | none | IPR003594 |
| PANTHER | 507 | 600 | 94 | PTHR24423 | none | none | none |
| SUPERFAMILY | 160 | 309 | 150 | SSF55781 | none | none | IPR029016 |
| Gene3D | 143 | 322 | 180 | G3DSA:3.30.450.40 | none | none | IPR029016 |
| Pfam | 157 | 306 | 150 | PF01590 | none | GAF domain | IPR003018 |
| PANTHER | 3 | 488 | 486 | PTHR24423 | none | none | none |
| Phobius | 1 | 20 | 20 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
3 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran2_2015_nEpis_3P | Qrob_Chr12 | 12 | s_1AOES6_1466 | s_1B0DDG_1094 | 28,97 | 28,55 | 30,1 | lod | 3.6 | 8.4 |
| Bourran2_2015_nP_3P | Qrob_Chr12 | 12 | v_10140_295 | v_838_303 | 16 | 14,69 | 18,01 | lod | 5.1 | 13.7 |
| Bourran2_2015_nSecLBD_3P | Qrob_Chr12 | 12 | s_A4YYC_633 | s_2F1IZB_703 | 18,64 | 18,01 | 21,53 | lod | 6.5 | 17.2 |
