Protein : Qrob_P0433400.2 Q. robur
Protein Identifier  ? Qrob_P0433400.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR11761//PTHR11761:SF9 - 50S/60S RIBOSOMAL PROTEIN L14/L23 // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 123  
Kegg Orthology  K02874
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0015934 large ribosomal subunit The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:18668068 1 122 + 122 none 100.00 122 96.72 6e-81 rpl14 CP95_p030 ribosomal protein L14
blastp_kegg lcl|pper:PrpeC_p058 1 122 + 122 none 100.00 122 96.72 6e-81 rpl14 ribosomal protein L14
blastp_kegg lcl|tcc:ThcaC_p057 1 122 + 122 none 100.00 122 95.90 7e-81 rpl14 ribosomal protein L14
blastp_kegg lcl|atr:s00585p00011490 1 122 + 122 none 100.00 122 96.72 5e-80 AMTR_s00585p00011490 hypothetical protein
blastp_kegg lcl|cit:4271188 1 122 + 122 none 100.00 122 94.26 2e-79 rpl14 CisiCp058 ribosomal protein L14
blastp_kegg lcl|sot:4099880 1 122 + 122 none 100.00 122 94.26 2e-79 rpl14 SotuCp059 50S ribosomal protein L14
blastp_kegg lcl|sly:3950421 1 122 + 122 none 100.00 122 94.26 2e-79 rpl14 LyesC2p033 ribosomal protein L14
blastp_kegg lcl|sly:101259965 1 122 + 122 none 80.26 152 94.26 3e-79 50S ribosomal protein L14 chloroplastic-like
blastp_kegg lcl|fve:10251557 1 122 + 122 none 100.00 122 95.08 1e-78 rpl14 FvH4_C0079 ribosomal protein L14
blastp_kegg lcl|rcu:RCOM_ORF00080 1 122 + 122 none 100.00 122 94.26 2e-78 rpl14 ribosomal protein L14
blastp_pdb 3bbo_M 1 122 + 122 Gaps:1 100.00 121 93.39 3e-77 mol:protein length:121 Ribosomal Protein L14
blastp_pdb 4dhc_O 1 122 + 122 none 100.00 122 60.66 4e-51 mol:protein length:122 50S Ribosomal Protein L14
blastp_pdb 4dha_O 1 122 + 122 none 100.00 122 60.66 4e-51 mol:protein length:122 50S Ribosomal Protein L14
blastp_pdb 4abs_O 1 122 + 122 none 100.00 122 60.66 4e-51 mol:protein length:122 50S RIBOSOMAL PROTEIN L14
blastp_pdb 3zvp_O 1 122 + 122 none 100.00 122 60.66 4e-51 mol:protein length:122 50S RIBOSOMAL PROTEIN L14
blastp_pdb 3uzn_N 1 122 + 122 none 100.00 122 60.66 4e-51 mol:protein length:122 50S ribosomal protein L14
blastp_pdb 3uzk_N 1 122 + 122 none 100.00 122 60.66 4e-51 mol:protein length:122 50S ribosomal protein L14
blastp_pdb 3uzh_N 1 122 + 122 none 100.00 122 60.66 4e-51 mol:protein length:122 50S ribosomal protein L14
blastp_pdb 3uzf_N 1 122 + 122 none 100.00 122 60.66 4e-51 mol:protein length:122 50S ribosomal protein L14
blastp_pdb 3uz9_N 1 122 + 122 none 100.00 122 60.66 4e-51 mol:protein length:122 50S ribosomal protein L14
blastp_uniprot_sprot sp|Q49KW2|RK14_EUCGG 1 122 + 122 none 100.00 122 94.26 2e-81 50S ribosomal protein L14 chloroplastic OS Eucalyptus globulus subsp. globulus GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|A0A372|RK14_COFAR 1 122 + 122 none 100.00 122 95.08 2e-81 50S ribosomal protein L14 chloroplastic OS Coffea arabica GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|Q09ME1|RK14_CITSI 1 122 + 122 none 100.00 122 94.26 6e-81 50S ribosomal protein L14 chloroplastic OS Citrus sinensis GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|Q06GW0|RK14_DRIGR 1 122 + 122 none 100.00 122 94.26 7e-81 50S ribosomal protein L14 chloroplastic OS Drimys granadensis GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|P06382|RK14_TOBAC 1 122 + 122 none 100.00 122 94.26 8e-81 50S ribosomal protein L14 chloroplastic OS Nicotiana tabacum GN rpl14 PE 3 SV 2
blastp_uniprot_sprot sp|Q2VEE4|RK14_SOLTU 1 122 + 122 none 100.00 122 94.26 8e-81 50S ribosomal protein L14 chloroplastic OS Solanum tuberosum GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|Q2MI64|RK14_SOLLC 1 122 + 122 none 100.00 122 94.26 8e-81 50S ribosomal protein L14 chloroplastic OS Solanum lycopersicum GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|Q2MIF1|RK14_SOLBU 1 122 + 122 none 100.00 122 94.26 8e-81 50S ribosomal protein L14 chloroplastic OS Solanum bulbocastanum GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|Q3C1L9|RK14_NICSY 1 122 + 122 none 100.00 122 94.26 8e-81 50S ribosomal protein L14 chloroplastic OS Nicotiana sylvestris GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|Q09G09|RK14_PLAOC 1 122 + 122 none 100.00 122 94.26 8e-81 50S ribosomal protein L14 chloroplastic OS Platanus occidentalis GN rpl14 PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 1 122 122 SSF50193 none none IPR023571
PANTHER 1 122 122 PTHR11761 none none IPR000218
Pfam 1 122 122 PF00238 none Ribosomal protein L14p/L23e IPR000218
ProSitePatterns 60 86 27 PS00049 none Ribosomal protein L14 signature. IPR019972
PANTHER 1 122 122 PTHR11761:SF9 none none none
Gene3D 1 122 122 G3DSA:2.40.150.20 none none IPR023571
Hamap 1 122 122 MF_01367 none 50S ribosomal protein L14 [rplN]. IPR000218
TIGRFAM 1 122 122 TIGR01067 none rplN_bact: ribosomal protein uL14 IPR005745

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting