Protein : Qrob_P0431370.2 Q. robur
Protein Identifier  ? Qrob_P0431370.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=7) KOG2922 - Uncharacterized conserved protein [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 206  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0015095 magnesium ion transmembrane transporter activity Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other.
GO:0015693 magnesium ion transport The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103327178 1 42 + 42 none 12.21 344 85.71 2e-13 magnesium transporter NIPA3-like
blastp_kegg lcl|pper:PRUPE_ppa008133mg 1 42 + 42 none 12.21 344 85.71 2e-13 hypothetical protein
blastp_kegg lcl|pxb:103942000 1 42 + 42 none 10.14 414 85.71 6e-13 magnesium transporter NIPA3-like
blastp_kegg lcl|pop:POPTR_0001s31310g 1 41 + 41 none 13.18 311 85.37 9e-13 POPTRDRAFT_841181 hypothetical protein
blastp_kegg lcl|tcc:TCM_003147 1 40 + 40 none 10.81 370 87.50 2e-12 Non-imprinted in Prader-Willi/Angelman syndrome region protein isoform 1
blastp_kegg lcl|mdm:103456298 1 42 + 42 none 12.21 344 83.33 4e-12 magnesium transporter NIPA2-like
blastp_kegg lcl|gmx:100799756 1 42 + 42 none 12.21 344 80.95 5e-12 magnesium transporter NIPA3-like
blastp_kegg lcl|cic:CICLE_v10025999mg 1 40 + 40 none 11.66 343 85.00 1e-11 hypothetical protein
blastp_kegg lcl|cit:102624164 1 40 + 40 none 11.66 343 85.00 1e-11 magnesium transporter NIPA3-like
blastp_kegg lcl|gmx:100783541 1 41 + 41 none 11.88 345 82.93 2e-11 magnesium transporter NIPA3-like
rpsblast_cdd gnl|CDD|114381 1 40 + 40 none 13.33 300 62.50 4e-09 pfam05653 Mg_trans_NIPA Magnesium transporter NIPA. NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters.
rpsblast_kog gnl|CDD|38133 1 40 + 40 none 11.94 335 65.00 1e-08 KOG2922 KOG2922 KOG2922 Uncharacterized conserved protein [Function unknown].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 6 25 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 26 205 180 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 3 41 39 PF05653 none Magnesium transporter NIPA IPR008521

1 Localization

Analysis Start End Length
TMHMM 6 25 19

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting