Protein : Qrob_P0431330.2 Q. robur
Protein Identifier  ? Qrob_P0431330.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) PTHR11730:SF17 - AMMONIUM TRANSPORTER MEP2 (PTHR11730:SF17) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 322  
Kegg Orthology  K03320
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008519 ammonium transmembrane transporter activity Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.
GO:0015696 ammonium transport The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.
GO:0072488 ammonium transmembrane transport The directed movement of ammonium across a membrane by means of some agent such as a transporter or pore. Ammonium is the cation NH4+.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10025453mg 5 314 + 310 none 62.63 495 88.06 0.0 hypothetical protein
blastp_kegg lcl|cit:102623874 5 314 + 310 none 62.63 495 87.74 0.0 ammonium transporter 3 member 1-like
blastp_kegg lcl|rcu:RCOM_0862770 1 314 + 314 Gaps:5 64.83 489 85.17 0.0 ammonium transporter putative
blastp_kegg lcl|mus:103986370 6 314 + 309 none 63.98 483 85.44 0.0 ammonium transporter 3 member 1-like
blastp_kegg lcl|mtr:MTR_8g095040 1 314 + 314 Gaps:3 65.36 485 84.86 0.0 Ammonium transporter 3 member
blastp_kegg lcl|pvu:PHAVU_002G277000g 1 314 + 314 Gaps:3 65.36 485 83.60 0.0 hypothetical protein
blastp_kegg lcl|fve:101313741 9 314 + 306 Gaps:1 63.67 479 88.52 0.0 ammonium transporter 3 member 1-like
blastp_kegg lcl|vvi:100256159 6 314 + 309 none 63.71 485 86.08 0.0 ammonium transporter 3 member 1-like
blastp_kegg lcl|gmx:100785993 1 314 + 314 Gaps:4 65.43 486 84.28 0.0 ammonium transporter 3 member 1-like
blastp_kegg lcl|cam:101499181 1 314 + 314 Gaps:3 65.23 486 84.23 0.0 ammonium transporter 3 member 2-like
blastp_pdb 2ns1_A 19 316 + 298 Gaps:24 67.48 412 36.33 2e-47 mol:protein length:412 Ammonia channel
blastp_pdb 1xqf_A 19 316 + 298 Gaps:24 66.51 418 36.33 2e-47 mol:protein length:418 Probable ammonium transporter
blastp_pdb 1xqe_A 19 316 + 298 Gaps:24 66.51 418 36.33 2e-47 mol:protein length:418 Probable ammonium transporter
blastp_pdb 2npe_A 19 316 + 298 Gaps:24 65.57 424 36.33 2e-47 mol:protein length:424 Ammonia channel
blastp_pdb 3c1g_A 19 316 + 298 Gaps:24 65.57 424 36.33 3e-47 mol:protein length:424 Ammonia channel
blastp_pdb 2nop_A 19 316 + 298 Gaps:24 65.57 424 36.33 3e-47 mol:protein length:424 Ammonia channel
blastp_pdb 2nmr_A 19 316 + 298 Gaps:24 65.57 424 36.33 3e-47 mol:protein length:424 Ammonia channel
blastp_pdb 2npj_A 19 316 + 298 Gaps:24 65.57 424 36.33 3e-47 mol:protein length:424 Ammonia channel
blastp_pdb 2npg_A 19 316 + 298 Gaps:24 65.57 424 36.33 3e-47 mol:protein length:424 Ammonia channel
blastp_pdb 2nuu_F 23 316 + 294 Gaps:24 66.02 415 36.50 5e-47 mol:protein length:415 Ammonia channel
blastp_uniprot_sprot sp|Q84KJ6|AMT31_ORYSJ 6 314 + 309 Gaps:6 62.85 498 82.43 0.0 Ammonium transporter 3 member 1 OS Oryza sativa subsp. japonica GN AMT3-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q851M9|AMT32_ORYSJ 6 314 + 309 none 64.51 479 78.64 6e-177 Ammonium transporter 3 member 2 OS Oryza sativa subsp. japonica GN AMT3-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q69T29|AMT33_ORYSJ 1 314 + 314 Gaps:2 65.00 480 77.56 2e-164 Ammonium transporter 3 member 3 OS Oryza sativa subsp. japonica GN AMT3-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S230|AMT22_ORYSJ 1 314 + 314 Gaps:1 62.48 501 70.93 2e-157 Ammonium transporter 2 member 2 OS Oryza sativa subsp. japonica GN AMT2-2 PE 2 SV 2
blastp_uniprot_sprot sp|Q84KJ7|AMT21_ORYSJ 17 314 + 298 Gaps:6 60.08 486 76.03 3e-155 Ammonium transporter 2 member 1 OS Oryza sativa subsp. japonica GN AMT2-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S233|AMT23_ORYSJ 1 314 + 314 Gaps:1 62.98 497 70.93 8e-155 Ammonium transporter 2 member 3 OS Oryza sativa subsp. japonica GN AMT2-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M6N7|AMT2_ARATH 18 316 + 299 Gaps:11 60.63 475 75.69 1e-146 Ammonium transporter 2 OS Arabidopsis thaliana GN AMT2 PE 1 SV 2
blastp_uniprot_sprot sp|O26759|Y663_METTH 22 314 + 293 Gaps:19 66.50 412 39.78 3e-58 Putative ammonium transporter MTH_663 OS Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN MTH_663 PE 3 SV 1
blastp_uniprot_sprot sp|O66515|AMT_AQUAE 22 314 + 293 Gaps:21 64.30 423 39.34 2e-54 Ammonia channel OS Aquifex aeolicus (strain VF5) GN amt PE 1 SV 1
blastp_uniprot_sprot sp|O26757|Y661_METTH 22 314 + 293 Gaps:20 67.08 407 35.53 1e-49 Putative ammonium transporter MTH_661 OS Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN MTH_661 PE 3 SV 1

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 51 61 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 20 314 295 G3DSA:1.10.3430.10 none none IPR029020
Phobius 82 136 55 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 17 104 88 PTHR11730:SF17 none none none
PANTHER 124 314 191 PTHR11730:SF17 none none none
Phobius 202 220 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 232 252 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 221 231 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 283 321 39 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 191 201 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 28 314 287 PF00909 none Ammonium Transporter Family IPR024041
Phobius 137 157 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 264 282 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 21 315 295 SSF111352 none none IPR024041
PANTHER 124 314 191 PTHR11730 none none IPR001905
Phobius 28 50 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 62 81 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 253 263 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 158 168 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 17 104 88 PTHR11730 none none IPR001905
Phobius 169 190 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 27 27 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

8 Localization

Analysis Start End Length
TMHMM 136 158 22
TMHMM 202 221 19
TMHMM 58 80 22
TMHMM 165 187 22
TMHMM 268 290 22
TMHMM 31 53 22
TMHMM 234 253 19
TMHMM 295 317 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting