Protein : Qrob_P0428550.2 Q. robur
Protein Identifier  ? Qrob_P0428550.2 Organism . Name  Quercus robur
Score  44.2 Score Type  egn
Protein Description  (M=1) KOG1356//KOG2884 - Putative transcription factor 5qNCA contains JmjC domain [Transcription]. // 26S proteasome regulatory complex subunit RPN10/PSMD4 [Posttranslational modification protein turnover chaperones]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 585  
Kegg Orthology  K03029
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0008540 proteasome regulatory particle, base subcomplex The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103953471 245 451 + 207 Gaps:7 52.61 403 81.60 1e-89 26S proteasome non-ATPase regulatory subunit 4 homolog
blastp_kegg lcl|gmx:100791370 245 455 + 211 Gaps:12 52.51 398 76.56 6e-89 26S proteasome non-ATPase regulatory subunit 4-like
blastp_kegg lcl|tcc:TCM_000185 245 450 + 206 Gaps:5 51.72 408 84.36 2e-86 26S proteasome non-ATPase regulatory subunit 4 isoform 1
blastp_kegg lcl|pop:POPTR_0007s09740g 245 451 + 207 Gaps:5 50.24 422 77.83 2e-86 hypothetical protein
blastp_kegg lcl|cam:101506262 245 451 + 207 Gaps:9 53.20 406 81.48 4e-86 26S proteasome non-ATPase regulatory subunit 4-like
blastp_kegg lcl|gmx:100780583 245 450 + 206 Gaps:5 52.10 405 81.04 1e-84 26S proteasome non-ATPase regulatory subunit 4 homolog
blastp_kegg lcl|gmx:100814594 245 511 + 267 Gaps:9 66.67 405 68.15 1e-84 26S proteasome non-ATPase regulatory subunit 4-like
blastp_kegg lcl|gmx:100803975 245 511 + 267 Gaps:9 66.67 405 67.04 2e-83 26S proteasome non-ATPase regulatory subunit 4-like
blastp_kegg lcl|pvu:PHAVU_003G264300g 245 450 + 206 Gaps:8 51.74 402 80.77 2e-83 hypothetical protein
blastp_kegg lcl|pxb:103967795 245 451 + 207 Gaps:7 52.74 402 82.55 3e-83 26S proteasome non-ATPase regulatory subunit 4 homolog
blastp_pdb 2x5n_A 245 353 + 109 Gaps:7 58.33 192 37.50 5e-17 mol:protein length:192 26S PROTEASOME REGULATORY SUBUNIT RPN10
blastp_uniprot_sprot sp|P55034|PSMD4_ARATH 245 429 + 185 Gaps:8 48.96 386 67.72 1e-62 26S proteasome non-ATPase regulatory subunit 4 homolog OS Arabidopsis thaliana GN RPN10 PE 1 SV 1
blastp_uniprot_sprot sp|O94444|RPN10_SCHPO 245 421 + 177 Gaps:22 67.90 243 45.45 1e-33 26S proteasome regulatory subunit rpn10 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN rpn10 PE 1 SV 1
blastp_uniprot_sprot sp|Q58DA0|PSMD4_BOVIN 249 396 + 148 Gaps:19 37.43 382 48.95 6e-29 26S proteasome non-ATPase regulatory subunit 4 OS Bos taurus GN PSMD4 PE 2 SV 1
blastp_uniprot_sprot sp|P55036|PSMD4_HUMAN 249 396 + 148 Gaps:19 37.93 377 48.95 6e-29 26S proteasome non-ATPase regulatory subunit 4 OS Homo sapiens GN PSMD4 PE 1 SV 1
blastp_uniprot_sprot sp|O35226|PSMD4_MOUSE 249 396 + 148 Gaps:19 38.03 376 48.95 8e-29 26S proteasome non-ATPase regulatory subunit 4 OS Mus musculus GN Psmd4 PE 1 SV 1
blastp_uniprot_sprot sp|P38886|RPN10_YEAST 246 396 + 151 Gaps:8 58.58 268 42.68 4e-27 26S proteasome regulatory subunit RPN10 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN RPN10 PE 1 SV 3
blastp_uniprot_sprot sp|Q553E0|PSMD4_DICDI 245 396 + 152 Gaps:25 39.83 349 43.17 1e-26 26S proteasome non-ATPase regulatory subunit 4 OS Dictyostelium discoideum GN psmD4 PE 2 SV 1
blastp_uniprot_sprot sp|P55035|PSMD4_DROME 249 410 + 162 Gaps:18 39.90 396 47.47 3e-26 26S proteasome non-ATPase regulatory subunit 4 OS Drosophila melanogaster GN Rpn10 PE 1 SV 2
blastp_uniprot_sprot sp|A2A3N6|PIPSL_HUMAN 249 396 + 148 Gaps:19 16.59 862 48.95 8e-25 Putative PIP5K1A and PSMD4-like protein OS Homo sapiens GN PIPSL PE 5 SV 1
blastp_uniprot_sprot sp|O17453|PSMD4_SCHMA 249 445 + 197 Gaps:19 45.71 420 35.94 2e-23 26S proteasome non-ATPase regulatory subunit 4 OS Schistosoma mansoni PE 2 SV 2
rpsblast_cdd gnl|CDD|34749 243 421 + 179 Gaps:22 68.72 243 43.11 1e-33 COG5148 RPN10 26S proteasome regulatory complex subunit RPN10/PSMD4 [Posttranslational modification protein turnover chaperones].
rpsblast_cdd gnl|CDD|29225 245 349 + 105 Gaps:6 58.29 187 50.46 1e-30 cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association..
rpsblast_cdd gnl|CDD|182059 40 103 + 64 Gaps:4 4.80 1250 45.00 3e-07 PRK09752 PRK09752 adhesin Provisional.
rpsblast_kog gnl|CDD|38095 243 430 + 188 Gaps:17 70.66 259 50.27 1e-47 KOG2884 KOG2884 KOG2884 26S proteasome regulatory complex subunit RPN10/PSMD4 [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|36570 446 584 + 139 Gaps:7 14.85 889 34.09 2e-19 KOG1356 KOG1356 KOG1356 Putative transcription factor 5qNCA contains JmjC domain [Transcription].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 243 335 93 SSF53300 none none IPR002035
ProSiteProfiles 383 402 20 PS50330 none Ubiquitin-interacting motif (UIM) domain profile. IPR003903
Coils 393 422 30 Coil none none none
PANTHER 245 418 174 PTHR10223 none none IPR027040

0 Localization

0 Qtllist

0 Targeting