Protein : Qrob_P0425700.2 Q. robur
Protein Identifier  ? Qrob_P0425700.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) PTHR22595:SF1 - WOUND-INDUCED PROTEIN WIN-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 162  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0042742 defense response to bacterium Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
GO:0050832 defense response to fungus Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101503489 5 161 + 157 Gaps:5 73.08 208 80.92 1e-84 hevein-like preproprotein-like
blastp_kegg lcl|rcu:RCOM_0484460 5 161 + 157 Gaps:6 74.75 202 81.46 3e-84 Wound-induced protein WIN2 precursor putative
blastp_kegg lcl|pop:POPTR_0013s03900g 5 161 + 157 Gaps:1 80.61 196 82.28 4e-84 POPTRDRAFT_571046 class 4 pathogenesis-related family protein
blastp_kegg lcl|cit:102611713 5 161 + 157 Gaps:2 80.31 193 81.94 2e-83 hevein-like preproprotein-like
blastp_kegg lcl|cit:102611414 5 161 + 157 Gaps:2 80.31 193 81.94 2e-83 hevein-like preproprotein-like
blastp_kegg lcl|cic:CICLE_v10029328mg 5 161 + 157 Gaps:2 80.31 193 80.00 3e-83 hypothetical protein
blastp_kegg lcl|cit:102611123 5 161 + 157 Gaps:2 80.31 193 81.29 3e-83 hevein-like preproprotein-like
blastp_kegg lcl|cic:CICLE_v10029327mg 5 161 + 157 Gaps:2 80.31 193 80.00 2e-82 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s03890g 5 161 + 157 Gaps:7 73.53 204 80.67 4e-82 POPTRDRAFT_823674 HEV1.2 family protein
blastp_kegg lcl|tcc:TCM_027204 5 161 + 157 Gaps:3 77.39 199 80.52 9e-82 Pathogenesis-related protein PR-4B
blastp_pdb 1bw4_A 40 161 + 122 Gaps:3 100.00 125 73.60 2e-60 mol:protein length:125 BARWIN BASIC BARLEY SEED PROTEIN
blastp_pdb 1bw3_A 40 161 + 122 Gaps:3 100.00 125 73.60 2e-60 mol:protein length:125 BARWIN BASIC BARLEY SEED PROTEIN
blastp_uniprot_sprot sp|P09761|WIN1_SOLTU 5 161 + 157 Gaps:1 78.00 200 74.36 2e-80 Wound-induced protein WIN1 OS Solanum tuberosum GN WIN1 PE 2 SV 1
blastp_uniprot_sprot sp|P09762|WIN2_SOLTU 5 161 + 157 Gaps:2 73.46 211 74.84 2e-79 Wound-induced protein WIN2 OS Solanum tuberosum GN WIN2 PE 2 SV 1
blastp_uniprot_sprot sp|P43082|HEVL_ARATH 5 161 + 157 Gaps:3 72.64 212 74.03 7e-79 Hevein-like preproprotein OS Arabidopsis thaliana GN HEL PE 1 SV 1
blastp_uniprot_sprot sp|P02877|HEVE_HEVBR 5 161 + 157 Gaps:3 75.49 204 74.03 8e-77 Pro-hevein OS Hevea brasiliensis GN HEV1 PE 1 SV 2
blastp_uniprot_sprot sp|P29063|PR4B_TOBAC 40 161 + 122 none 82.99 147 76.23 1e-66 Pathogenesis-related protein PR-4B OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P32045|PRP2_SOLLC 37 159 + 123 none 86.01 143 69.11 1e-60 Pathogenesis-related protein P2 OS Solanum lycopersicum PE 1 SV 1
blastp_uniprot_sprot sp|P28814|BARW_HORVU 40 161 + 122 Gaps:3 100.00 125 72.80 3e-59 Barwin OS Hordeum vulgare PE 1 SV 1
blastp_uniprot_sprot sp|P29062|PR4A_TOBAC 37 161 + 125 none 85.03 147 72.80 5e-59 Pathogenesis-related protein PR-4A OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|O64393|WHW2_WHEAT 44 161 + 118 Gaps:3 81.76 148 73.55 9e-57 Wheatwin-2 OS Triticum aestivum GN PR4B PE 1 SV 1
blastp_uniprot_sprot sp|P83343|PR4_PRUPE 59 161 + 103 none 96.26 107 77.67 3e-56 Pathogenesis-related protein PR-4 (Fragment) OS Prunus persica PE 2 SV 1
rpsblast_cdd gnl|CDD|201533 41 159 + 119 none 100.00 119 79.83 2e-56 pfam00967 Barwin Barwin family.
rpsblast_kog gnl|CDD|39939 8 158 + 151 Gaps:24 53.50 286 15.03 4e-08 KOG4742 KOG4742 KOG4742 Predicted chitinase [General function prediction only].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProDom 5 27 23 PD000609 none CHITIN-BINDING CHITINASE PRECURSOR SIGNAL GLYCOSIDASE HYDROLASE LECTIN DEGRADATION DIRECT SEQUENCING IPR001002
ProDom 48 161 114 PD004535 none PATHOGENESIS-RELATED PRECURSOR SIGNAL CHITIN-BINDING DEFENSE PLANT DIRECT SEQUENCING 3D-STRUCTURE 4A IPR001153
Gene3D 5 28 24 G3DSA:3.30.60.10 none none IPR001002
PANTHER 35 159 125 PTHR22595 none none none
SUPERFAMILY 41 160 120 SSF50685 none none IPR009009
Pfam 41 159 119 PF00967 none Barwin family IPR001153
ProSitePatterns 100 108 9 PS00771 none Barwin domain signature 1. IPR018226
Gene3D 41 161 121 G3DSA:2.40.40.10 none none IPR014733
ProSitePatterns 152 159 8 PS00772 none Barwin domain signature 2. IPR018226
PRINTS 134 158 25 PR00602 none Barwin domain signature IPR001153
PRINTS 94 112 19 PR00602 none Barwin domain signature IPR001153
PRINTS 75 93 19 PR00602 none Barwin domain signature IPR001153
PRINTS 113 131 19 PR00602 none Barwin domain signature IPR001153
PANTHER 35 159 125 PTHR22595:SF1 none none none
ProSiteProfiles 40 161 122 PS51174 none Barwin domain profile. IPR001153

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting