Protein : Qrob_P0425690.2 Q. robur
Protein Identifier  ? Qrob_P0425690.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR22595:SF1 - WOUND-INDUCED PROTEIN WIN-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 211  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0042742 defense response to bacterium Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
GO:0050832 defense response to fungus Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0484460 4 210 + 207 Gaps:9 98.02 202 79.80 4e-110 Wound-induced protein WIN2 precursor putative
blastp_kegg lcl|pop:POPTR_0013s03890g 9 210 + 202 Gaps:13 95.59 204 81.54 4e-108 POPTRDRAFT_823674 HEV1.2 family protein
blastp_kegg lcl|cam:101503489 1 208 + 208 Gaps:15 99.52 208 78.26 2e-107 hevein-like preproprotein-like
blastp_kegg lcl|gmx:548085 9 208 + 200 Gaps:5 95.26 211 81.09 1e-102 WIN wound-induced protein
blastp_kegg lcl|cit:102611713 1 198 + 198 Gaps:5 100.00 193 78.24 6e-99 hevein-like preproprotein-like
blastp_kegg lcl|cit:102611414 1 198 + 198 Gaps:5 100.00 193 78.24 6e-99 hevein-like preproprotein-like
blastp_kegg lcl|pop:POPTR_0013s03900g 1 198 + 198 Gaps:2 100.00 196 80.10 1e-98 POPTRDRAFT_571046 class 4 pathogenesis-related family protein
blastp_kegg lcl|cic:CICLE_v10029328mg 1 198 + 198 Gaps:5 100.00 193 77.72 1e-98 hypothetical protein
blastp_kegg lcl|cit:102611123 1 198 + 198 Gaps:5 100.00 193 78.24 1e-98 hevein-like preproprotein-like
blastp_kegg lcl|pvu:PHAVU_006G102200g 10 208 + 199 Gaps:11 95.43 197 77.13 5e-98 hypothetical protein
blastp_pdb 1bw4_A 77 198 + 122 Gaps:3 100.00 125 73.60 3e-59 mol:protein length:125 BARWIN BASIC BARLEY SEED PROTEIN
blastp_pdb 1bw3_A 77 198 + 122 Gaps:3 100.00 125 73.60 3e-59 mol:protein length:125 BARWIN BASIC BARLEY SEED PROTEIN
blastp_pdb 1q9b_A 21 62 + 42 none 97.67 43 71.43 8e-14 mol:protein length:43 Hevein
blastp_pdb 1hev_A 21 62 + 42 none 97.67 43 71.43 8e-14 mol:protein length:43 HEVEIN
blastp_pdb 1wkx_A 21 62 + 42 none 97.67 43 69.05 2e-13 mol:protein length:43 HEVEIN ISOFORM 2
blastp_pdb 1t0w_A 21 52 + 32 none 96.97 33 71.88 1e-08 mol:protein length:33 Hevein
blastp_pdb 3iwr_B 21 63 + 43 Gaps:2 13.27 309 58.54 2e-06 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 21 63 + 43 Gaps:2 13.27 309 58.54 2e-06 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 21 63 + 43 Gaps:2 13.27 309 58.54 2e-06 mol:protein length:309 chitinase
blastp_uniprot_sprot sp|P02877|HEVE_HEVBR 4 207 + 204 Gaps:6 97.06 204 73.23 4e-101 Pro-hevein OS Hevea brasiliensis GN HEV1 PE 1 SV 2
blastp_uniprot_sprot sp|P09762|WIN2_SOLTU 6 210 + 205 Gaps:6 95.26 211 70.65 8e-95 Wound-induced protein WIN2 OS Solanum tuberosum GN WIN2 PE 2 SV 1
blastp_uniprot_sprot sp|P09761|WIN1_SOLTU 6 198 + 193 Gaps:4 94.50 200 70.90 8e-90 Wound-induced protein WIN1 OS Solanum tuberosum GN WIN1 PE 2 SV 1
blastp_uniprot_sprot sp|P43082|HEVL_ARATH 3 208 + 206 Gaps:13 97.64 212 69.57 4e-89 Hevein-like preproprotein OS Arabidopsis thaliana GN HEL PE 1 SV 1
blastp_uniprot_sprot sp|P29063|PR4B_TOBAC 77 198 + 122 none 82.99 147 72.95 6e-62 Pathogenesis-related protein PR-4B OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P28814|BARW_HORVU 77 198 + 122 Gaps:3 100.00 125 72.80 5e-58 Barwin OS Hordeum vulgare PE 1 SV 1
blastp_uniprot_sprot sp|P32045|PRP2_SOLLC 74 196 + 123 none 86.01 143 68.29 6e-58 Pathogenesis-related protein P2 OS Solanum lycopersicum PE 1 SV 1
blastp_uniprot_sprot sp|P29062|PR4A_TOBAC 74 198 + 125 none 85.03 147 72.00 5e-57 Pathogenesis-related protein PR-4A OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|O64392|WHW1_WHEAT 81 198 + 118 Gaps:3 82.88 146 74.38 9e-56 Wheatwin-1 OS Triticum aestivum GN PR4A PE 1 SV 1
blastp_uniprot_sprot sp|O64393|WHW2_WHEAT 81 198 + 118 Gaps:3 81.76 148 73.55 1e-55 Wheatwin-2 OS Triticum aestivum GN PR4B PE 1 SV 1
rpsblast_cdd gnl|CDD|201533 78 196 + 119 none 100.00 119 82.35 1e-55 pfam00967 Barwin Barwin family.

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 137 145 9 PS00771 none Barwin domain signature 1. IPR018226
PRINTS 150 168 19 PR00602 none Barwin domain signature IPR001153
PRINTS 112 130 19 PR00602 none Barwin domain signature IPR001153
PRINTS 171 195 25 PR00602 none Barwin domain signature IPR001153
PRINTS 131 149 19 PR00602 none Barwin domain signature IPR001153
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 15 123 109 PTHR22595 none none none
ProDom 21 61 41 PD000609 none CHITIN-BINDING CHITINASE PRECURSOR SIGNAL GLYCOSIDASE HYDROLASE LECTIN DEGRADATION DIRECT SEQUENCING IPR001002
ProDom 85 198 114 PD004535 none PATHOGENESIS-RELATED PRECURSOR SIGNAL CHITIN-BINDING DEFENSE PLANT DIRECT SEQUENCING 3D-STRUCTURE 4A IPR001153
SMART 22 61 40 SM00270 none Chitin binding domain IPR001002
Gene3D 78 198 121 G3DSA:2.40.40.10 none none IPR014733
Pfam 78 196 119 PF00967 none Barwin family IPR001153
ProSiteProfiles 20 63 44 PS50941 none Chitin-binding type-1 domain profile. IPR001002
Phobius 21 210 190 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 15 123 109 PTHR22595:SF1 none none none
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSiteProfiles 77 198 122 PS51174 none Barwin domain profile. IPR001153
ProSitePatterns 189 196 8 PS00772 none Barwin domain signature 2. IPR018226
SUPERFAMILY 78 197 120 SSF50685 none none IPR009009
PRINTS 38 45 8 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 45 52 8 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 30 38 9 PR00451 none Chitin-binding domain signature IPR001002
ProSitePatterns 32 51 20 PS00026 none Chitin recognition or binding domain signature. IPR018371
Phobius 16 20 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 22 63 42 SSF57016 none none IPR001002
Pfam 20 61 42 PF00187 none Chitin recognition protein IPR001002
Gene3D 21 61 41 G3DSA:3.30.60.10 none none IPR001002
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_EUK 1 20 19
SignalP_GRAM_POSITIVE 1 20 19
SignalP_GRAM_NEGATIVE 1 20 19

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting