Protein : Qrob_P0424740.2 Q. robur
Protein Identifier  ? Qrob_P0424740.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=23) KOG0252//KOG0253//KOG0254//KOG0255//KOG0569 - Inorganic phosphate transporter [Inorganic ion transport and metabolism]. // Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]. // Predicted transporter (major facilitator superfamily) [General function prediction only]. // Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 482  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0022891 substrate-specific transmembrane transporter activity Enables the transfer of a specific substance or group of related substances from one side of a membrane to the other.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0002s22860g 1 480 + 480 Gaps:3 99.79 484 76.40 0.0 POPTRDRAFT_816762 sugar transporter family protein
blastp_kegg lcl|pmum:103333821 1 481 + 481 Gaps:6 100.00 475 78.95 0.0 sugar transporter ERD6-like 7
blastp_kegg lcl|cit:102613177 1 480 + 480 Gaps:7 99.79 478 77.78 0.0 sugar transporter ERD6-like 7-like
blastp_kegg lcl|cic:CICLE_v10019923mg 1 480 + 480 Gaps:7 98.76 483 77.78 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_004484 1 480 + 480 Gaps:5 99.79 484 76.19 0.0 Major facilitator superfamily protein isoform 1
blastp_kegg lcl|pvu:PHAVU_001G147100g 1 481 + 481 Gaps:8 100.00 473 76.96 0.0 hypothetical protein
blastp_kegg lcl|vvi:100263109 1 480 + 480 Gaps:8 99.18 490 78.19 0.0 sugar transporter ERD6-like 7-like
blastp_kegg lcl|gmx:100785248 1 481 + 481 Gaps:10 100.00 471 78.13 0.0 sugar transporter ERD6-like 7-like
blastp_kegg lcl|cam:101493931 1 480 + 480 Gaps:10 99.37 473 75.96 0.0 sugar transporter ERD6-like 7-like
blastp_kegg lcl|mdm:103449084 1 480 + 480 Gaps:4 100.00 476 75.42 0.0 sugar transporter ERD6-like 7
blastp_uniprot_sprot sp|P93051|ERDL7_ARATH 16 480 + 465 Gaps:10 98.27 463 72.53 0.0 Sugar transporter ERD6-like 7 OS Arabidopsis thaliana GN At2g48020 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LBI9|EDL16_ARATH 1 481 + 481 Gaps:3 99.59 482 60.00 0.0 Sugar transporter ERD6-like 16 OS Arabidopsis thaliana GN At5g18840 PE 2 SV 2
blastp_uniprot_sprot sp|Q0WQ63|ERDL8_ARATH 4 477 + 474 Gaps:13 98.51 470 58.10 0.0 Sugar transporter ERD6-like 8 OS Arabidopsis thaliana GN At3g05150 PE 2 SV 1
blastp_uniprot_sprot sp|Q3ECP7|ERDL5_ARATH 13 479 + 467 Gaps:3 98.72 470 52.16 4e-175 Sugar transporter ERD6-like 5 OS Arabidopsis thaliana GN At1g54730 PE 2 SV 2
blastp_uniprot_sprot sp|Q94KE0|ERDL3_ARATH 45 481 + 437 none 92.98 470 46.45 2e-142 Sugar transporter ERD6-like 3 OS Arabidopsis thaliana GN SUGTL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LTP6|EDL13_ARATH 1 481 + 481 Gaps:16 98.16 488 44.26 3e-141 Putative sugar transporter ERD6-like 13 OS Arabidopsis thaliana GN At3g20460 PE 3 SV 2
blastp_uniprot_sprot sp|O04036|ERD6_ARATH 15 481 + 467 Gaps:14 91.33 496 46.36 9e-141 Sugar transporter ERD6 OS Arabidopsis thaliana GN ERD6 PE 1 SV 3
blastp_uniprot_sprot sp|Q94AF9|EDL11_ARATH 11 480 + 470 Gaps:7 99.14 467 43.41 3e-140 Sugar transporter ERD6-like 11 OS Arabidopsis thaliana GN At3g05165 PE 2 SV 2
blastp_uniprot_sprot sp|Q93Z80|EDL10_ARATH 27 480 + 454 Gaps:4 98.25 458 43.56 4e-138 Sugar transporter ERD6-like 10 OS Arabidopsis thaliana GN At3g05160 PE 2 SV 1
blastp_uniprot_sprot sp|Q93YP9|ERDL4_ARATH 1 477 + 477 Gaps:10 99.39 488 42.89 1e-135 Sugar transporter ERD6-like 4 OS Arabidopsis thaliana GN At1g19450 PE 2 SV 1
rpsblast_cdd gnl|CDD|200987 50 478 + 429 Gaps:26 99.55 449 35.35 5e-74 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|162084 44 475 + 432 Gaps:36 95.22 481 33.19 3e-71 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|182225 95 477 + 383 Gaps:49 84.34 479 31.19 1e-55 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|162095 35 427 + 393 Gaps:29 95.48 398 21.84 2e-19 TIGR00895 2A0115 benzoate transport.
rpsblast_cdd gnl|CDD|162097 90 474 + 385 Gaps:38 73.47 505 22.91 3e-18 TIGR00898 2A0119 cation transport protein.
rpsblast_cdd gnl|CDD|119392 50 219 + 170 Gaps:4 49.43 352 24.71 6e-14 cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
rpsblast_cdd gnl|CDD|191813 52 427 + 376 Gaps:52 98.84 346 18.71 3e-12 pfam07690 MFS_1 Major Facilitator Superfamily.
rpsblast_cdd gnl|CDD|130366 44 230 + 187 Gaps:34 27.09 742 27.86 3e-10 TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by PFAM HMM pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
rpsblast_cdd gnl|CDD|188094 58 455 + 398 Gaps:101 97.72 394 24.42 6e-10 TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083) including citrate-H+ symporters dicarboxylate:H+ symporters the proline/glycine-betaine transporter ProP etc.
rpsblast_cdd gnl|CDD|129965 197 475 + 279 Gaps:44 59.16 502 24.24 1e-08 TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

39 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 333 350 18 PS00216 none Sugar transport proteins signature 1. IPR005829
Phobius 192 196 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 44 67 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 140 159 20 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 404 416 13 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 292 302 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 381 402 22 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
Phobius 1 43 43 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 4 481 478 PTHR24063:SF245 none none none
Phobius 171 191 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 378 403 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 197 218 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 57 477 421 PF00083 none Sugar (and other) transporter IPR005828
Phobius 219 277 59 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 367 377 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 298 316 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 87 107 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 281 474 194 G3DSA:1.20.1250.20 none none none
Gene3D 57 229 173 G3DSA:1.20.1250.20 none none none
Phobius 134 144 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 415 434 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 446 464 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 114 133 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
TIGRFAM 35 475 441 TIGR00879 "Reactome:REACT_15518" SP: MFS transporter, sugar porter (SP) family IPR003663
Phobius 344 366 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 278 297 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 404 414 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 108 113 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSitePatterns 103 120 18 PS00216 none Sugar transport proteins signature 1. IPR005829
PANTHER 4 481 478 PTHR24063 none none none

12 Localization

Analysis Start End Length
TMHMM 315 337 22
TMHMM 173 195 22
TMHMM 46 68 22
TMHMM 442 464 22
TMHMM 199 218 19
TMHMM 144 166 22
TMHMM 88 110 22
TMHMM 344 366 22
TMHMM 278 300 22
TMHMM 381 403 22
TMHMM 415 437 22
TMHMM 117 139 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting