Protein : Qrob_P0415830.2 Q. robur
Protein Identifier  ? Qrob_P0415830.2 Organism . Name  Quercus robur
Score  49.3 Score Type  egn
Protein Description  (M=31) KOG1650 - Predicted K+/H+-antiporter [Inorganic ion transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 810  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0015299 solute:proton antiporter activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out).

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_016379 2 800 + 799 Gaps:4 99.38 806 80.02 0.0 Cation/H+ exchanger 18
blastp_kegg lcl|pxb:103927292 1 800 + 800 Gaps:10 99.88 807 78.04 0.0 cation/H(+) antiporter 18
blastp_kegg lcl|pper:PRUPE_ppa001527mg 1 801 + 801 Gaps:17 100.00 808 77.48 0.0 hypothetical protein
blastp_kegg lcl|pmum:103337603 2 801 + 800 Gaps:14 99.50 808 77.49 0.0 cation/H(+) antiporter 18-like
blastp_kegg lcl|mdm:103447323 1 800 + 800 Gaps:10 99.88 807 77.54 0.0 cation/H(+) antiporter 18
blastp_kegg lcl|mdm:103404175 1 800 + 800 Gaps:11 99.88 806 76.40 0.0 cation/H(+) antiporter 18-like
blastp_kegg lcl|tcc:TCM_016378 2 801 + 800 Gaps:7 99.50 803 73.97 0.0 Cation/H+ exchanger 18 isoform 1
blastp_kegg lcl|fve:101299764 1 799 + 799 Gaps:10 99.63 804 75.66 0.0 cation/H(+) antiporter 17-like
blastp_kegg lcl|cic:CICLE_v10018903mg 6 800 + 795 Gaps:9 99.38 801 75.50 0.0 hypothetical protein
blastp_kegg lcl|cit:102627943 6 800 + 795 Gaps:9 99.38 801 75.25 0.0 cation/H(+) antiporter 18-like
blastp_uniprot_sprot sp|Q9FFR9|CHX18_ARATH 1 801 + 801 Gaps:9 100.00 810 68.52 0.0 Cation/H(+) antiporter 18 OS Arabidopsis thaliana GN CHX18 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUQ7|CHX17_ARATH 1 780 + 780 Gaps:23 97.44 820 67.21 0.0 Cation/H(+) antiporter 17 OS Arabidopsis thaliana GN CHX17 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LUN4|CHX19_ARATH 2 807 + 806 Gaps:15 99.12 800 64.06 0.0 Cation/H(+) antiporter 19 OS Arabidopsis thaliana GN CHX19 PE 2 SV 1
blastp_uniprot_sprot sp|Q1HDT3|CHX16_ARATH 5 779 + 775 Gaps:34 96.79 811 61.40 0.0 Cation/H(+) antiporter 16 OS Arabidopsis thaliana GN CHX16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M353|CHX20_ARATH 11 788 + 778 Gaps:63 97.51 842 51.64 0.0 Cation/H(+) antiporter 20 OS Arabidopsis thaliana GN CHX20 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIT5|CHX15_ARATH 2 776 + 775 Gaps:21 95.25 821 50.26 0.0 Cation/H(+) antiporter 15 OS Arabidopsis thaliana GN CHX15 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYD4|CHX23_ARATH 20 780 + 761 Gaps:24 88.00 867 35.52 7e-141 Cation/H(+) antiporter 23 chloroplastic OS Arabidopsis thaliana GN CHX23 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SKA9|CHX21_ARATH 21 784 + 764 Gaps:30 92.31 832 34.64 1e-133 Cation/H(+) antiporter 21 OS Arabidopsis thaliana GN CHX21 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LMJ1|CHX14_ARATH 8 788 + 781 Gaps:41 92.88 829 33.90 1e-128 Cation/H(+) antiporter 14 OS Arabidopsis thaliana GN CHX14 PE 2 SV 1
blastp_uniprot_sprot sp|O22920|CHX13_ARATH 8 806 + 799 Gaps:48 94.71 831 34.18 2e-122 Cation/H(+) symporter 13 OS Arabidopsis thaliana GN CHX13 PE 1 SV 1
rpsblast_cdd gnl|CDD|178704 2 776 + 775 Gaps:22 94.11 832 52.11 0.0 PLN03159 PLN03159 cation/H(+) antiporter 15 Provisional.
rpsblast_cdd gnl|CDD|201544 37 423 + 387 Gaps:22 99.73 370 32.79 6e-60 pfam00999 Na_H_Exchanger Sodium/hydrogen exchanger family. Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.
rpsblast_cdd gnl|CDD|30823 30 432 + 403 Gaps:29 97.23 397 28.50 2e-52 COG0475 KefB Kef-type K+ transport systems membrane components [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|162117 50 328 + 279 Gaps:28 95.60 273 30.27 1e-36 TIGR00932 2a37 transporter monovalent cation:proton antiporter-2 (CPA2) family.
rpsblast_cdd gnl|CDD|34270 26 435 + 410 Gaps:33 96.81 408 28.35 7e-18 COG4651 RosB Kef-type K+ transport system predicted NAD-binding component [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|179594 59 427 + 369 Gaps:55 56.04 621 27.30 5e-16 PRK03562 PRK03562 glutathione-regulated potassium-efflux system protein KefC Provisional.
rpsblast_cdd gnl|CDD|179625 59 349 + 291 Gaps:38 45.42 601 27.47 2e-12 PRK03659 PRK03659 glutathione-regulated potassium-efflux system protein KefB Provisional.
rpsblast_cdd gnl|CDD|30375 32 349 + 318 Gaps:25 72.96 429 18.53 4e-08 COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].
rpsblast_kog gnl|CDD|36863 12 779 + 768 Gaps:30 99.61 769 50.52 0.0 KOG1650 KOG1650 KOG1650 Predicted K+/H+-antiporter [Inorganic ion transport and metabolism].

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 297 340 44 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 37 422 386 PF00999 none Sodium/hydrogen exchanger family IPR006153
Phobius 192 216 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 394 404 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 222 242 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 124 146 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 789 789 PTHR32468:SF0 none none none
Phobius 28 47 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 27 27 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 341 366 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 789 789 PTHR32468 none none none
Phobius 76 94 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 113 123 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 367 372 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 428 809 382 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 95 112 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 405 427 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 158 180 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 181 191 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 48 58 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 217 221 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 147 157 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 373 393 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 59 75 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 243 262 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 263 296 34 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

12 Localization

Analysis Start End Length
TMHMM 58 75 17
TMHMM 342 364 22
TMHMM 313 335 22
TMHMM 161 180 19
TMHMM 224 246 22
TMHMM 192 214 22
TMHMM 271 293 22
TMHMM 29 51 22
TMHMM 90 112 22
TMHMM 405 427 22
TMHMM 124 146 22
TMHMM 374 393 19

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting