Protein : Qrob_P0415320.2 Q. robur
Protein Identifier  ? Qrob_P0415320.2 Organism . Name  Quercus robur
Protein Description  (M=10) K00384 - thioredoxin reductase (NADPH) [EC:1.8.1.9] Alias (in v1)  Qrob_P0465070.1
Code Enzyme  EC:1.8.1.9 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 366  
Kegg Orthology  K00384
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0004791 thioredoxin-disulfide reductase activity Catalysis of the reaction: NADP(+) + thioredoxin = H(+) + NADPH + thioredoxin disulfide.
GO:0019430 removal of superoxide radicals Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100263578 26 365 + 340 Gaps:2 90.37 374 84.91 0.0 thioredoxin reductase 2-like
blastp_kegg lcl|ath:AT2G17420 39 365 + 327 Gaps:1 86.24 378 85.58 0.0 NTRA NADPH-dependent thioredoxin reductase A
blastp_kegg lcl|cam:101506489 5 365 + 361 Gaps:1 98.09 367 78.61 0.0 thioredoxin reductase 2-like
blastp_kegg lcl|aly:ARALYDRAFT_319692 39 365 + 327 none 85.83 381 84.10 0.0 thioredoxin reductase
blastp_kegg lcl|tcc:TCM_000987 24 365 + 342 Gaps:4 89.89 376 81.07 0.0 NADPH-dependent thioredoxin reductase A
blastp_kegg lcl|gmx:100790557 2 365 + 364 Gaps:2 97.31 372 77.62 0.0 thioredoxin reductase 2-like
blastp_kegg lcl|pper:PRUPE_ppa007040mg 28 365 + 338 Gaps:3 87.01 385 85.97 0.0 hypothetical protein
blastp_kegg lcl|cmo:103490638 26 365 + 340 Gaps:2 86.89 389 82.84 0.0 thioredoxin reductase NTRB
blastp_kegg lcl|csv:101205755 31 365 + 335 Gaps:2 84.95 392 83.78 0.0 thioredoxin reductase 2-like
blastp_kegg lcl|crb:CARUB_v10013889mg 39 365 + 327 Gaps:1 82.74 394 85.28 0.0 hypothetical protein
blastp_pdb 1vdc_A 40 365 + 326 Gaps:1 97.60 333 82.46 0.0 mol:protein length:333 NADPH DEPENDENT THIOREDOXIN REDUCTASE
blastp_pdb 2whd_B 38 365 + 328 Gaps:5 92.02 351 77.40 2e-171 mol:protein length:351 THIOREDOXIN REDUCTASE
blastp_pdb 2whd_A 38 365 + 328 Gaps:5 92.02 351 77.40 2e-171 mol:protein length:351 THIOREDOXIN REDUCTASE
blastp_pdb 3d8x_B 41 357 + 317 Gaps:11 96.32 326 64.65 8e-143 mol:protein length:326 Thioredoxin reductase 1
blastp_pdb 3d8x_A 41 357 + 317 Gaps:11 96.32 326 64.65 8e-143 mol:protein length:326 Thioredoxin reductase 1
blastp_pdb 3itj_D 38 357 + 320 Gaps:11 93.79 338 64.04 2e-142 mol:protein length:338 Thioredoxin reductase 1
blastp_pdb 3itj_C 38 357 + 320 Gaps:11 93.79 338 64.04 2e-142 mol:protein length:338 Thioredoxin reductase 1
blastp_pdb 3itj_B 38 357 + 320 Gaps:11 93.79 338 64.04 2e-142 mol:protein length:338 Thioredoxin reductase 1
blastp_pdb 3itj_A 38 357 + 320 Gaps:11 93.79 338 64.04 2e-142 mol:protein length:338 Thioredoxin reductase 1
blastp_pdb 2a87_B 42 356 + 315 Gaps:18 89.85 335 53.16 2e-94 mol:protein length:335 Thioredoxin reductase
blastp_uniprot_sprot sp|Q39242|TRXB2_ARATH 39 365 + 327 Gaps:1 85.12 383 85.58 0.0 Thioredoxin reductase 2 OS Arabidopsis thaliana GN NTR2 PE 2 SV 2
blastp_uniprot_sprot sp|Q39243|TRXB1_ARATH 40 365 + 326 Gaps:1 86.67 375 82.46 0.0 Thioredoxin reductase 1 OS Arabidopsis thaliana GN NTR1 PE 1 SV 3
blastp_uniprot_sprot sp|Q6ZFU6|NTRB_ORYSJ 38 365 + 328 Gaps:5 97.58 331 77.71 1e-177 Thioredoxin reductase NTRB OS Oryza sativa subsp. japonica GN NTRB PE 2 SV 1
blastp_uniprot_sprot sp|Q69PS6|NTRA_ORYSJ 38 365 + 328 Gaps:5 87.77 368 77.71 4e-166 Thioredoxin reductase NTRA OS Oryza sativa subsp. japonica GN Os06g0327300 PE 3 SV 2
blastp_uniprot_sprot sp|Q6FR39|TRXB_CANGA 41 357 + 317 Gaps:11 98.43 319 64.65 7e-143 Thioredoxin reductase OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN TRR1 PE 3 SV 1
blastp_uniprot_sprot sp|P29509|TRXB1_YEAST 37 357 + 321 Gaps:11 99.69 319 63.84 9e-143 Thioredoxin reductase 1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TRR1 PE 1 SV 3
blastp_uniprot_sprot sp|Q6HA24|TRXB_KLULA 34 357 + 324 Gaps:11 91.98 349 63.55 1e-141 Thioredoxin reductase mitochondrial OS Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN TRR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q92375|TRXB_SCHPO 37 357 + 321 Gaps:11 98.76 322 63.84 4e-141 Thioredoxin reductase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN trr1 PE 1 SV 1
blastp_uniprot_sprot sp|P51978|TRXB_NEUCR 38 356 + 319 Gaps:9 94.61 334 64.87 2e-140 Thioredoxin reductase OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN cys-9 PE 3 SV 1
blastp_uniprot_sprot sp|Q6C7L4|TRXB_YARLI 37 356 + 320 Gaps:11 99.37 319 63.41 1e-139 Thioredoxin reductase OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN TRR1 PE 3 SV 1

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 193 257 65 PF00070 none Pyridine nucleotide-disulphide oxidoreductase IPR001327
PRINTS 41 63 23 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 171 183 13 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 145 153 9 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 317 335 19 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 100 110 11 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 188 212 25 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 282 303 22 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 79 94 16 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 240 256 17 PR00469 none Pyridine nucleotide disulphide reductase class-II signature IPR000103
PRINTS 192 210 19 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 280 296 17 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 144 162 19 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 42 61 20 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
PRINTS 307 329 23 PR00368 none FAD-dependent pyridine nucleotide reductase signature none
ProSitePatterns 178 200 23 PS00573 none Pyridine nucleotide-disulphide oxidoreductases class-II active site. IPR008255
TIGRFAM 41 354 314 TIGR01292 "KEGG:00240+1.8.1.9","KEGG:00450+1.8.1.9" TRX_reduct: thioredoxin-disulfide reductase IPR005982
PANTHER 42 354 313 PTHR22912 none none none
PANTHER 42 354 313 PTHR22912:SF96 none none none
Gene3D 149 348 200 G3DSA:3.50.50.60 none none none
Pfam 41 332 292 PF07992 none Pyridine nucleotide-disulphide oxidoreductase IPR023753
Gene3D 40 148 109 G3DSA:3.50.50.60 none none none
SUPERFAMILY 38 354 317 SSF51905 none none none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting