Protein : Qrob_P0413850.2 Q. robur
Protein Identifier  ? Qrob_P0413850.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR31311:SF3 - GLYCOSYLTRANSFERASE 6-RELATED (PTHR31311:SF3) Code Enzyme  EC:2.4.2.39
Gene Prediction Quality  validated Protein length 

Sequence

Length: 334  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016757 transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005794 Golgi apparatus A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_000817 17 333 + 317 Gaps:55 80.44 455 56.28 8e-135 Galactosyl transferase GMA12/MNN10 family protein isoform 1
blastp_kegg lcl|cit:102628669 7 332 + 326 Gaps:55 82.96 452 55.47 4e-132 putative glycosyltransferase 7-like
blastp_kegg lcl|cic:CICLE_v10025585mg 7 332 + 326 Gaps:55 82.96 452 55.20 7e-132 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0581290 17 332 + 316 Gaps:56 82.06 446 56.01 1e-131 transferase putative (EC:2.4.2.39)
blastp_kegg lcl|pop:POPTR_0007s14840g 4 332 + 329 Gaps:58 82.49 457 54.38 3e-131 POPTRDRAFT_655536 alpha galactosyltransferase family protein
blastp_kegg lcl|csv:101222323 17 333 + 317 Gaps:56 82.21 444 55.62 2e-130 galactomannan galactosyltransferase 1-like
blastp_kegg lcl|cmo:103484867 17 333 + 317 Gaps:56 82.02 445 55.07 2e-129 galactomannan galactosyltransferase 1-like
blastp_kegg lcl|pop:POPTR_0014s00890g 9 332 + 324 Gaps:56 81.66 458 54.01 3e-129 POPTRDRAFT_663687 alpha galactosyltransferase family protein
blastp_kegg lcl|sot:102588764 17 333 + 317 Gaps:55 80.44 455 53.83 4e-128 putative glycosyltransferase 7-like
blastp_kegg lcl|sly:101265691 17 333 + 317 Gaps:55 80.44 455 53.55 5e-128 putative glycosyltransferase 7-like
blastp_uniprot_sprot sp|O81007|GT7_ARATH 17 332 + 316 Gaps:56 81.51 449 53.55 2e-125 Putative glycosyltransferase 7 OS Arabidopsis thaliana GN GT7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZG1|GT6_ARATH 17 332 + 316 Gaps:56 84.72 432 52.73 7e-124 Glycosyltransferase 6 OS Arabidopsis thaliana GN GT6 PE 2 SV 1
blastp_uniprot_sprot sp|Q564G7|GMGT1_CYATE 17 333 + 317 Gaps:61 82.76 435 53.06 4e-121 Galactomannan galactosyltransferase 1 OS Cyamopsis tetragonoloba GN GMGT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9CA75|GT5_ARATH 26 329 + 304 Gaps:55 71.55 457 37.00 2e-57 Putative glycosyltransferase 5 OS Arabidopsis thaliana GN GT5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LF80|GT3_ARATH 26 320 + 295 Gaps:48 68.05 457 37.30 5e-57 Putative glycosyltransferase 3 OS Arabidopsis thaliana GN GT3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LZJ3|XT1_ARATH 31 318 + 288 Gaps:43 66.30 460 39.34 1e-55 Xyloglucan 6-xylosyltransferase OS Arabidopsis thaliana GN XT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M9U0|GT4_ARATH 27 320 + 294 Gaps:48 60.43 513 37.42 2e-55 Putative glycosyltransferase 4 OS Arabidopsis thaliana GN GT4 PE 2 SV 1
blastp_uniprot_sprot sp|O22775|GT2_ARATH 26 318 + 293 Gaps:51 67.25 461 38.39 4e-54 Putative glycosyltransferase 2 OS Arabidopsis thaliana GN GT2 PE 2 SV 1
rpsblast_cdd gnl|CDD|178723 17 333 + 317 Gaps:56 81.02 453 58.04 1e-141 PLN03181 PLN03181 glycosyltransferase Provisional.
rpsblast_cdd gnl|CDD|178724 26 318 + 293 Gaps:74 72.03 429 40.13 2e-68 PLN03182 PLN03182 xyloglucan 6-xylosyltransferase Provisional.
rpsblast_cdd gnl|CDD|203296 61 283 + 223 Gaps:93 98.74 239 30.51 5e-24 pfam05637 Glyco_transf_34 galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
rpsblast_kog gnl|CDD|39945 17 315 + 299 Gaps:58 84.34 364 25.73 2e-32 KOG4748 KOG4748 KOG4748 Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism Cell wall/membrane/envelope biogenesis].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 257 332 76 PTHR31311 none none none
PANTHER 17 238 222 PTHR31311 none none none
Pfam 126 282 157 PF05637 none galactosyl transferase GMA12/MNN10 family IPR008630
Pfam 60 114 55 PF05637 none galactosyl transferase GMA12/MNN10 family IPR008630
PANTHER 17 238 222 PTHR31311:SF3 none none none
PANTHER 257 332 76 PTHR31311:SF3 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

0 Targeting