Protein : Qrob_P0410340.2 Q. robur
Protein Identifier  ? Qrob_P0410340.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR10231//PTHR10231:SF45 - NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 264  
Kegg Orthology  K15272
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0000139 Golgi membrane The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
GO:0005351 sugar:proton symporter activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in).
GO:0008643 carbohydrate transport The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103490445 3 262 + 260 Gaps:85 95.28 360 54.23 2e-107 CMP-sialic acid transporter 4
blastp_kegg lcl|csv:101213027 3 262 + 260 Gaps:85 95.28 360 54.23 2e-107 CMP-sialic acid transporter 4-like
blastp_kegg lcl|rcu:RCOM_1043060 3 262 + 260 Gaps:78 94.38 356 55.65 2e-106 CMP-sialic acid transporter putative
blastp_kegg lcl|pmum:103334627 3 262 + 260 Gaps:79 95.06 344 55.66 6e-106 CMP-sialic acid transporter 4
blastp_kegg lcl|pper:PRUPE_ppa008121mg 3 262 + 260 Gaps:79 95.06 344 55.66 6e-106 hypothetical protein
blastp_kegg lcl|pxb:103933536 3 262 + 260 Gaps:79 95.34 343 54.74 1e-105 CMP-sialic acid transporter 4-like
blastp_kegg lcl|pxb:103926699 3 262 + 260 Gaps:79 95.34 343 54.74 1e-105 CMP-sialic acid transporter 4-like
blastp_kegg lcl|cam:101500177 3 263 + 261 Gaps:77 95.45 352 53.87 3e-105 CMP-sialic acid transporter 4-like
blastp_kegg lcl|cic:CICLE_v10028748mg 3 263 + 261 Gaps:80 95.42 349 55.56 3e-105 hypothetical protein
blastp_kegg lcl|cit:102609325 3 263 + 261 Gaps:80 95.42 349 55.56 3e-105 CMP-sialic acid transporter 4-like
blastp_uniprot_sprot sp|F4JN00|CSTR4_ARATH 3 262 + 260 Gaps:82 95.45 352 53.57 6e-99 CMP-sialic acid transporter 4 OS Arabidopsis thaliana GN At4g35335 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LGE9|CSTR1_ARATH 52 253 + 202 Gaps:82 81.76 340 33.09 5e-23 CMP-sialic acid transporter 1 OS Arabidopsis thaliana GN At5g41760 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5H6|CSTR3_ARATH 48 254 + 207 Gaps:81 70.62 405 23.78 4e-10 CMP-sialic acid transporter 3 OS Arabidopsis thaliana GN UTR6 PE 2 SV 1
blastp_uniprot_sprot sp|Q93890|SRF3_CAEEL 44 256 + 213 Gaps:76 77.99 368 21.95 1e-08 UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS Caenorhabditis elegans GN srf-3 PE 1 SV 5
rpsblast_cdd gnl|CDD|112934 127 263 + 137 Gaps:80 90.34 238 24.65 8e-14 pfam04142 Nuc_sug_transp Nucleotide-sugar transporter. This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc.
rpsblast_kog gnl|CDD|37445 37 263 + 227 Gaps:85 89.28 345 25.97 2e-23 KOG2234 KOG2234 KOG2234 Predicted UDP-galactose transporter [Carbohydrate transport and metabolism].

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 235 260 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 16 261 246 PTHR10231:SF45 none none none
PANTHER 16 261 246 PTHR10231 none none IPR007271
Phobius 261 263 3 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 70 121 52 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 173 192 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 117 166 50 PF04142 none Nucleotide-sugar transporter IPR007271
Phobius 142 152 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 193 215 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 50 69 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 122 141 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 49 49 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 153 172 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 216 234 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

5 Localization

Analysis Start End Length
TMHMM 123 142 19
TMHMM 192 209 17
TMHMM 157 179 22
TMHMM 238 260 22
TMHMM 50 69 19

0 Qtllist

0 Targeting