Protein : Qrob_P0409210.2 Q. robur
Protein Identifier  ? Qrob_P0409210.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=8) 4.1.1.25 - Tyrosine decarboxylase. Code Enzyme  EC:4.1.1.28, EC:4.1.1.25
Gene Prediction Quality  validated Protein length 

Sequence

Length: 507  
Kegg Orthology  K01592
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0016831 carboxy-lyase activity Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102628190 1 506 + 506 none 100.00 506 75.49 0.0 tyrosine/DOPA decarboxylase 3-like
blastp_kegg lcl|cic:CICLE_v10018100mg 1 504 + 504 none 99.60 506 74.80 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_006060 1 506 + 506 Gaps:9 99.61 517 73.98 0.0 Tyrosine/DOPA decarboxylase
blastp_kegg lcl|tcc:TCM_006064 1 503 + 503 Gaps:11 91.43 560 73.24 0.0 Tyrosine/DOPA decarboxylase
blastp_kegg lcl|cit:102607468 1 504 + 504 Gaps:8 99.22 516 72.66 0.0 tyrosine/DOPA decarboxylase 1-like
blastp_kegg lcl|pmum:103325216 1 503 + 503 Gaps:7 98.25 515 73.52 0.0 tyrosine/DOPA decarboxylase 1-like
blastp_kegg lcl|pper:PRUPE_ppa018413mg 16 503 + 488 Gaps:6 98.20 499 75.31 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10033968mg 19 504 + 486 Gaps:8 98.60 501 73.89 0.0 hypothetical protein
blastp_kegg lcl|cit:102616375 1 506 + 506 Gaps:13 99.23 521 70.41 0.0 tyrosine/DOPA decarboxylase 2-like
blastp_kegg lcl|cic:CICLE_v10000723mg 1 506 + 506 Gaps:13 91.18 567 70.60 0.0 hypothetical protein
blastp_pdb 3rch_B 21 503 + 483 Gaps:34 98.96 480 44.00 3e-144 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rch_A 21 503 + 483 Gaps:34 98.96 480 44.00 3e-144 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_B 21 503 + 483 Gaps:34 98.96 480 44.00 3e-144 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_A 21 503 + 483 Gaps:34 98.96 480 44.00 3e-144 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbf_B 21 503 + 483 Gaps:34 98.96 480 44.00 3e-144 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 3rbf_A 21 503 + 483 Gaps:34 98.96 480 44.00 3e-144 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 1js6_B 21 496 + 476 Gaps:34 96.30 486 43.80 2e-136 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js6_A 21 496 + 476 Gaps:34 96.30 486 43.80 2e-136 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_B 21 496 + 476 Gaps:34 96.30 486 43.80 2e-136 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_A 21 496 + 476 Gaps:34 96.30 486 43.80 2e-136 mol:protein length:486 DOPA decarboxylase
blastp_uniprot_sprot sp|P54769|TYDC2_PAPSO 1 505 + 505 Gaps:20 98.49 531 70.17 0.0 Tyrosine/DOPA decarboxylase 2 OS Papaver somniferum GN TYDC2 PE 2 SV 1
blastp_uniprot_sprot sp|P54770|TYDC3_PAPSO 1 505 + 505 Gaps:22 98.50 533 69.33 0.0 Tyrosine/DOPA decarboxylase 3 OS Papaver somniferum GN TYDC3 PE 2 SV 2
blastp_uniprot_sprot sp|P54768|TYDC1_PAPSO 8 503 + 496 Gaps:8 97.30 518 71.63 0.0 Tyrosine/DOPA decarboxylase 1 OS Papaver somniferum GN TYDC1 PE 2 SV 1
blastp_uniprot_sprot sp|P54771|TYDC5_PAPSO 1 503 + 503 Gaps:17 98.28 523 70.23 0.0 Tyrosine/DOPA decarboxylase 5 OS Papaver somniferum GN TYDC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q06088|TYDC4_PETCR 14 505 + 492 Gaps:2 96.46 508 69.59 0.0 Tyrosine decarboxylase 4 OS Petroselinum crispum GN TYRDC-4 PE 2 SV 1
blastp_uniprot_sprot sp|Q06087|TYDC3_PETCR 14 503 + 490 Gaps:2 94.57 516 69.88 0.0 Tyrosine decarboxylase 3 OS Petroselinum crispum GN TYRDC-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q06086|TYDC2_PETCR 14 503 + 490 Gaps:2 94.94 514 69.67 0.0 Tyrosine decarboxylase 2 OS Petroselinum crispum GN TYRDC-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q06085|TYDC1_PETCR 25 458 + 434 Gaps:2 100.00 432 71.53 0.0 Tyrosine decarboxylase 1 (Fragment) OS Petroselinum crispum GN TYRDC-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RY79|TYDC1_ARATH 10 505 + 496 Gaps:6 100.00 490 58.37 0.0 Tyrosine decarboxylase 1 OS Arabidopsis thaliana GN ELI5 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XHL3|TYDC1_ORYSJ 18 505 + 488 Gaps:6 96.98 497 56.02 0.0 Tyrosine decarboxylase 1 OS Oryza sativa subsp. japonica GN Os07g0437500 PE 2 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 395 505 111 G3DSA:3.90.1150.10 none none IPR015422
Gene3D 104 393 290 G3DSA:3.40.640.10 none none IPR015421
Pfam 55 428 374 PF00282 none Pyridoxal-dependent decarboxylase conserved domain IPR002129
SUPERFAMILY 22 501 480 SSF53383 none none IPR015424
PRINTS 114 132 19 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 158 178 21 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 133 152 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 367 382 16 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 410 429 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 26 45 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 93 112 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 49 66 18 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 67 86 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
ProSitePatterns 311 332 22 PS00392 none DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. IPR021115
PANTHER 16 506 491 PTHR11999:SF70 none none none
Gene3D 21 101 81 G3DSA:1.20.1340.10 none none none
PANTHER 16 506 491 PTHR11999 none none none

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting