Protein : Qrob_P0407070.2 Q. robur
Protein Identifier  ? Qrob_P0407070.2 Organism . Name  Quercus robur
Score  98.1 Score Type  egn
Protein Description  (M=2) PF00656//PF06943 - Caspase domain // LSD1 zinc finger Gene Prediction Quality  validated
Protein length 

Sequence

Length: 395  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004197 cysteine-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007008mg 19 394 + 376 Gaps:28 100.00 386 75.39 0.0 hypothetical protein
blastp_kegg lcl|vvi:100249579 21 394 + 374 Gaps:13 98.11 370 77.96 0.0 metacaspase-1-like
blastp_kegg lcl|fve:101305984 21 394 + 374 Gaps:25 98.95 381 74.01 0.0 metacaspase-1-like
blastp_kegg lcl|sot:102590125 19 394 + 376 Gaps:12 100.00 370 75.68 0.0 metacaspase-1-like
blastp_kegg lcl|pmum:103331492 19 394 + 376 Gaps:43 100.00 389 73.26 0.0 metacaspase-1-like
blastp_kegg lcl|sly:101249016 19 394 + 376 Gaps:13 100.00 369 76.15 0.0 metacaspase-1-like
blastp_kegg lcl|rcu:RCOM_0658580 19 394 + 376 Gaps:20 100.00 376 74.47 0.0 caspase putative
blastp_kegg lcl|mus:103975087 21 394 + 374 Gaps:19 99.16 358 77.18 0.0 metacaspase-1-like
blastp_kegg lcl|pda:103704623 19 394 + 376 Gaps:21 100.00 361 73.96 0.0 metacaspase-1-like
blastp_kegg lcl|csv:101226964 20 394 + 375 Gaps:15 98.09 367 76.11 0.0 metacaspase-1-like
blastp_pdb 4afp_A 45 342 + 298 Gaps:40 85.01 367 32.05 4e-32 mol:protein length:367 METACASPASE MCA2
blastp_pdb 4af8_A 45 342 + 298 Gaps:40 85.01 367 32.05 5e-32 mol:protein length:367 METACASPASE MCA2
blastp_pdb 4afv_A 45 342 + 298 Gaps:40 85.01 367 31.73 2e-31 mol:protein length:367 METACASPASE MCA2
blastp_pdb 4afr_A 45 342 + 298 Gaps:40 85.01 367 31.73 2e-31 mol:protein length:367 METACASPASE
blastp_pdb 3bij_C 151 248 + 98 Gaps:5 32.63 285 30.11 3e-06 mol:protein length:285 Uncharacterized protein GSU0716
blastp_pdb 3bij_B 151 248 + 98 Gaps:5 32.63 285 30.11 3e-06 mol:protein length:285 Uncharacterized protein GSU0716
blastp_pdb 3bij_A 151 248 + 98 Gaps:5 32.63 285 30.11 3e-06 mol:protein length:285 Uncharacterized protein GSU0716
blastp_uniprot_sprot sp|Q7XJE6|MCA1_ARATH 20 394 + 375 Gaps:22 96.73 367 76.62 6e-180 Metacaspase-1 OS Arabidopsis thaliana GN AMC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XJE5|MCA2_ARATH 19 394 + 376 Gaps:60 100.00 418 54.31 6e-138 Metacaspase-2 OS Arabidopsis thaliana GN AMC2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FMG1|MCA3_ARATH 96 394 + 299 Gaps:26 75.97 362 53.45 2e-86 Metacaspase-3 OS Arabidopsis thaliana GN AMC3 PE 2 SV 1
blastp_uniprot_sprot sp|Q75B43|MCA1_ASHGO 96 387 + 292 Gaps:67 65.27 452 39.32 2e-56 Metacaspase-1 OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN MCA1 PE 3 SV 1
blastp_uniprot_sprot sp|A5D9W7|MCA1_PICGU 93 342 + 250 Gaps:31 67.56 410 38.99 7e-55 Metacaspase-1 OS Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN MCA1 PE 3 SV 2
blastp_uniprot_sprot sp|A3LSY7|MCA1_PICST 93 341 + 249 Gaps:31 68.49 403 38.04 1e-53 Metacaspase-1 OS Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN MCA1 PE 3 SV 1
blastp_uniprot_sprot sp|Q7S4N5|MCA1B_NEUCR 96 342 + 247 Gaps:32 61.90 441 37.36 6e-53 Metacaspase-1B OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN mca-2 PE 3 SV 1
blastp_uniprot_sprot sp|Q4PEQ5|MCA1_USTMA 95 343 + 249 Gaps:31 68.16 402 35.04 5e-51 Metacaspase-1 OS Ustilago maydis (strain 521 / FGSC 9021) GN MCA1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6BH13|MCA1_DEBHA 93 343 + 251 Gaps:31 63.18 440 38.49 7e-51 Metacaspase-1 OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN MCA1 PE 3 SV 2
blastp_uniprot_sprot sp|A6SDT7|MCA1_BOTFB 93 341 + 249 Gaps:30 63.81 431 37.09 2e-50 Metacaspase-1 OS Botryotinia fuckeliana (strain B05.10) GN casA PE 3 SV 1
rpsblast_cdd gnl|CDD|201376 98 342 + 245 Gaps:43 88.60 228 28.71 3e-34 pfam00656 Peptidase_C14 Caspase domain.
rpsblast_cdd gnl|CDD|130125 22 52 + 31 none 100.00 31 48.39 3e-07 TIGR01053 LSD1 zinc finger domain LSD1 subclass. This model describes a putative zinc finger domain found in three closely spaced copies in Arabidopsis protein LSD1 and in two copies in other proteins from the same species. The motif resembles CxxCRxxLMYxxGASxVxCxxC.
rpsblast_kog gnl|CDD|36759 19 392 + 374 Gaps:37 99.72 362 42.66 1e-108 KOG1546 KOG1546 KOG1546 Metacaspase involved in regulation of apoptosis [Cell cycle control cell division chromosome partitioning Posttranslational modification protein turnover chaperones].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 96 392 297 G3DSA:3.40.50.1460 none none IPR029030
Pfam 98 384 287 PF00656 none Caspase domain IPR011600
Gene3D 18 51 34 G3DSA:3.30.60.20 none none none
Pfam 25 49 25 PF06943 none LSD1 zinc finger IPR005735
TIGRFAM 22 52 31 TIGR01053 none LSD1: zinc finger domain, LSD1 subclass IPR005735
PANTHER 372 394 23 PTHR31773 none none none
PANTHER 90 344 255 PTHR31773 none none none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting