Protein : Qrob_P0402810.2 Q. robur
Protein Identifier  ? Qrob_P0402810.2 Organism . Name  Quercus robur
Score  99.2 Score Type  egn
Protein Description  (M=1) PTHR11071:SF174 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC (PTHR11071:SF174) Code Enzyme  EC:5.2.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 403  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0000413 protein peptidyl-prolyl isomerization The modification of a protein by cis-trans isomerization of a proline residue.
GO:0003755 peptidyl-prolyl cis-trans isomerase activity Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102610807 2 402 + 401 Gaps:1 87.39 460 81.84 0.0 peptidyl-prolyl cis-trans isomerase CYP37 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10008220mg 2 402 + 401 Gaps:1 87.39 460 81.59 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0663360 1 402 + 402 Gaps:1 100.00 403 81.64 0.0 peptidyl-prolyl cis-trans isomerase putative
blastp_kegg lcl|vvi:100258986 1 402 + 402 Gaps:4 100.00 400 82.25 0.0 peptidyl-prolyl cis-trans isomerase CYP37 chloroplastic-like
blastp_kegg lcl|pop:POPTR_0001s41530g 2 402 + 401 Gaps:1 83.58 481 81.59 0.0 hypothetical protein
blastp_kegg lcl|pmum:103326249 1 401 + 401 Gaps:2 86.98 461 82.04 0.0 peptidyl-prolyl cis-trans isomerase CYP37 chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa005409mg 1 401 + 401 Gaps:3 87.01 462 82.34 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_031352 1 402 + 402 Gaps:1 87.75 457 78.80 0.0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
blastp_kegg lcl|csv:101223899 4 402 + 399 Gaps:1 87.15 459 79.50 0.0 peptidyl-prolyl cis-trans isomerase CYP37 chloroplastic-like
blastp_kegg lcl|csv:101205375 4 402 + 399 Gaps:1 87.15 459 79.50 0.0 peptidyl-prolyl cis-trans isomerase CYP37 chloroplastic-like
blastp_uniprot_sprot sp|P82869|CYP37_ARATH 16 399 + 384 Gaps:1 82.62 466 77.40 0.0 Peptidyl-prolyl cis-trans isomerase CYP37 chloroplastic OS Arabidopsis thaliana GN CYP37 PE 1 SV 3
blastp_uniprot_sprot sp|Q55118|PPI3_SYNY3 75 397 + 323 Gaps:40 82.59 379 36.10 1e-42 Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase sll0408 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN sll0408 PE 3 SV 2
blastp_uniprot_sprot sp|O49939|TLP40_SPIOL 43 399 + 357 Gaps:46 80.40 449 32.13 8e-36 Peptidyl-prolyl cis-trans isomerase chloroplastic OS Spinacia oleracea GN TLP40 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SSA5|CYP38_ARATH 53 400 + 348 Gaps:36 79.18 437 31.50 1e-35 Peptidyl-prolyl cis-trans isomerase CYP38 chloroplastic OS Arabidopsis thaliana GN CYP38 PE 1 SV 1
blastp_uniprot_sprot sp|P72704|PPI1_SYNY3 199 396 + 198 Gaps:46 77.24 246 38.95 6e-20 Probable peptidyl-prolyl cis-trans isomerase sll0227 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN sll0227 PE 3 SV 1
rpsblast_cdd gnl|CDD|29395 229 392 + 164 Gaps:18 100.00 176 40.91 7e-40 cd01924 cyclophilin_TLP40_like cyclophilin_TLP40_like: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) similar ot the Spinach thylakoid lumen protein TLP40. Compared to the archetypal cyclophilin Human cyclophilin A these proteins have similar peptidylprolyl cis- trans isomerase activity and reduced affinity for cyclosporin A. Spinach TLP40 has been shown to have a dual function as a folding catalyst and regulator of dephosphorylation..
rpsblast_cdd gnl|CDD|30997 236 388 + 153 Gaps:36 82.91 158 27.48 2e-10 COG0652 PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification protein turnover chaperones].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 129 398 270 PTHR11071 none none IPR024936
ProSiteProfiles 222 379 158 PS50072 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. IPR002130
SUPERFAMILY 236 386 151 SSF50891 none none IPR029000
PANTHER 129 398 270 PTHR11071:SF174 none none none
Gene3D 236 385 150 G3DSA:2.40.100.10 none none IPR029000
Pfam 236 382 147 PF00160 none Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IPR002130

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting