Protein : Qrob_P0401940.2 Q. robur
Protein Identifier  ? Qrob_P0401940.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR11785:SF267 - CATIONIC AMINO ACID TRANSPORTER 5 (PTHR11785:SF267) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 588  
Kegg Orthology  K03294
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003333 amino acid transmembrane transport The directed movement of amino acids, organic acids containing one or more amino substituents across a membrane by means of some agent such as a transporter or pore.
GO:0015171 amino acid transmembrane transporter activity Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_005985 1 580 + 580 none 98.64 588 84.14 0.0 Cationic amino acid transporter 5
blastp_kegg lcl|vvi:100254353 1 587 + 587 Gaps:1 99.49 589 84.98 0.0 uncharacterized LOC100254353
blastp_kegg lcl|pmum:103325522 1 587 + 587 none 99.49 590 81.09 0.0 cationic amino acid transporter 5-like
blastp_kegg lcl|mdm:103445983 1 587 + 587 none 99.49 590 81.60 0.0 cationic amino acid transporter 5-like
blastp_kegg lcl|pxb:103932404 1 587 + 587 none 99.49 590 81.60 0.0 cationic amino acid transporter 5-like
blastp_kegg lcl|pper:PRUPE_ppa018037mg 1 580 + 580 none 96.67 600 81.38 0.0 hypothetical protein
blastp_kegg lcl|fve:101303098 2 587 + 586 Gaps:3 99.33 593 79.29 0.0 cationic amino acid transporter 5-like
blastp_kegg lcl|sly:101253855 4 581 + 578 none 99.14 583 79.07 0.0 cationic amino acid transporter 5-like
blastp_kegg lcl|pop:POPTR_0003s15340g 1 587 + 587 Gaps:1 99.49 589 80.03 0.0 POPTRDRAFT_800060 cationic amino acid transporter 5 family protein
blastp_kegg lcl|sot:102595081 4 581 + 578 none 99.14 583 78.55 0.0 cationic amino acid transporter 5-like
blastp_pdb 3gia_A 70 486 + 417 Gaps:38 90.32 444 23.94 2e-13 mol:protein length:444 Uncharacterized protein MJ0609
blastp_pdb 3gi9_C 70 486 + 417 Gaps:38 90.32 444 23.94 2e-13 mol:protein length:444 Uncharacterized protein MJ0609
blastp_pdb 3gi8_C 70 486 + 417 Gaps:38 90.32 444 23.94 4e-13 mol:protein length:444 Uncharacterized protein MJ0609
blastp_pdb 3ncy_D 84 416 + 333 Gaps:48 72.58 445 26.63 3e-06 mol:protein length:445 AdiC
blastp_pdb 3ncy_C 84 416 + 333 Gaps:48 72.58 445 26.63 3e-06 mol:protein length:445 AdiC
blastp_pdb 3ncy_B 84 416 + 333 Gaps:48 72.58 445 26.63 3e-06 mol:protein length:445 AdiC
blastp_pdb 3ncy_A 84 416 + 333 Gaps:48 72.58 445 26.63 3e-06 mol:protein length:445 AdiC
blastp_pdb 3lrc_D 84 405 + 322 Gaps:43 70.34 445 25.56 7e-06 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_C 84 405 + 322 Gaps:43 70.34 445 25.56 7e-06 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_B 84 405 + 322 Gaps:43 70.34 445 25.56 7e-06 mol:protein length:445 Arginine/agmatine antiporter
blastp_uniprot_sprot sp|O64759|CAAT5_ARATH 9 568 + 560 Gaps:1 98.59 569 79.14 0.0 Cationic amino acid transporter 5 OS Arabidopsis thaliana GN CAT5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHH0|CAAT8_ARATH 6 567 + 562 Gaps:3 95.42 590 63.94 0.0 Cationic amino acid transporter 8 vacuolar OS Arabidopsis thaliana GN CAT8 PE 1 SV 1
blastp_uniprot_sprot sp|Q84MA5|CAAT1_ARATH 5 581 + 577 Gaps:3 97.64 594 61.90 0.0 Cationic amino acid transporter 1 OS Arabidopsis thaliana GN CAT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SQZ0|CAAT7_ARATH 15 563 + 549 Gaps:33 95.55 584 42.83 7e-139 Cationic amino acid transporter 7 chloroplastic OS Arabidopsis thaliana GN CAT7 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LZ20|CAAT6_ARATH 27 584 + 558 Gaps:25 96.91 583 41.06 1e-138 Cationic amino acid transporter 6 chloroplastic OS Arabidopsis thaliana GN CAT6 PE 2 SV 1
blastp_uniprot_sprot sp|Q797A7|YFNA_BACSU 56 450 + 395 Gaps:14 86.55 461 34.84 1e-67 Uncharacterized amino acid permease YfnA OS Bacillus subtilis (strain 168) GN yfnA PE 3 SV 1
blastp_uniprot_sprot sp|P70423|CTR3_MOUSE 37 577 + 541 Gaps:77 98.06 618 29.21 3e-64 Cationic amino acid transporter 3 OS Mus musculus GN Slc7a3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GYB4|CAAT3_ARATH 41 444 + 404 Gaps:16 67.00 609 33.33 3e-64 Cationic amino acid transporter 3 mitochondrial OS Arabidopsis thaliana GN CAT3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5D6|CAAT9_ARATH 61 568 + 508 Gaps:31 91.56 569 30.52 2e-62 Cationic amino acid transporter 9 chloroplastic OS Arabidopsis thaliana GN CAT9 PE 2 SV 1
blastp_uniprot_sprot sp|Q8WY07|CTR3_HUMAN 39 581 + 543 Gaps:86 98.71 619 27.50 3e-62 Cationic amino acid transporter 3 OS Homo sapiens GN SLC7A3 PE 1 SV 1

35 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 71 71 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 501 565 65 PTHR11785:SF267 none none none
Phobius 504 514 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 413 417 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 347 373 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 106 128 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 265 286 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 129 148 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 394 412 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 298 321 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 515 534 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 287 297 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 374 393 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 225 245 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 535 539 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 219 224 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 73 479 407 PF13520 none Amino acid permease IPR002293
Phobius 72 94 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 246 264 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 540 562 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 481 503 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 174 199 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 15 446 432 PTHR11785:SF267 none none none
Phobius 451 475 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 418 439 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 15 446 432 PTHR11785 none none IPR002293
PANTHER 501 565 65 PTHR11785 none none IPR002293
Phobius 563 587 25 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 440 450 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 511 560 50 PF13906 none C-terminus of AA_permease IPR029485

13 Localization

Analysis Start End Length
TMHMM 107 129 22
TMHMM 299 321 22
TMHMM 510 532 22
TMHMM 347 369 22
TMHMM 417 439 22
TMHMM 73 95 22
TMHMM 538 560 22
TMHMM 257 279 22
TMHMM 481 503 22
TMHMM 452 471 19
TMHMM 396 413 17
TMHMM 225 247 22
TMHMM 149 171 22

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting