Protein : Qrob_P0401680.2 Q. robur
Protein Identifier  ? Qrob_P0401680.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=1) PTHR11040//PTHR11040:SF28 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 204  
Kegg Orthology  K14709
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0046873 metal ion transmembrane transporter activity Enables the transfer of metal ions from one side of a membrane to the other.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0122460 6 200 + 195 Gaps:11 55.71 359 70.00 8e-93 zinc/iron transporter putative (EC:1.3.1.74)
blastp_kegg lcl|mdm:103435313 14 200 + 187 Gaps:2 53.09 356 68.78 3e-86 zinc transporter 1-like
blastp_kegg lcl|cic:CICLE_v10012062mg 4 200 + 197 Gaps:7 75.86 261 61.62 5e-81 hypothetical protein
blastp_kegg lcl|cit:102627766 4 200 + 197 Gaps:7 55.77 355 62.12 7e-81 zinc transporter 8-like
blastp_kegg lcl|fve:101311547 14 200 + 187 Gaps:2 53.24 355 71.43 2e-80 zinc transporter 1-like
blastp_kegg lcl|vvi:100262239 5 200 + 196 Gaps:6 55.07 345 63.68 2e-80 zinc transporter 1-like
blastp_kegg lcl|pmum:103325650 4 200 + 197 Gaps:10 56.77 347 60.91 1e-77 zinc transporter 1-like
blastp_kegg lcl|sot:102578180 20 200 + 181 Gaps:8 50.86 348 62.15 1e-77 zinc transporter 8-like
blastp_kegg lcl|pvu:PHAVU_006G001000g 9 200 + 192 Gaps:2 53.67 354 59.47 1e-77 hypothetical protein
blastp_kegg lcl|sly:101252338 20 200 + 181 Gaps:8 51.01 347 62.15 2e-77 zinc transporter 1-like
blastp_uniprot_sprot sp|O81123|ZIP1_ARATH 5 200 + 196 Gaps:18 53.52 355 57.89 1e-66 Zinc transporter 1 OS Arabidopsis thaliana GN ZIP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6L8G0|ZIP5_ORYSJ 6 200 + 195 Gaps:11 55.52 353 50.00 3e-55 Zinc transporter 5 OS Oryza sativa subsp. japonica GN ZIP5 PE 2 SV 1
blastp_uniprot_sprot sp|O23039|ZIP5_ARATH 20 200 + 181 Gaps:10 50.83 360 46.45 1e-48 Zinc transporter 5 OS Arabidopsis thaliana GN ZIP5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIS2|ZIP12_ARATH 7 200 + 194 Gaps:17 54.93 355 47.18 5e-48 Probable zinc transporter 12 OS Arabidopsis thaliana GN ZIP12 PE 3 SV 1
blastp_uniprot_sprot sp|Q0DHE3|ZIP9_ORYSJ 9 199 + 191 Gaps:31 55.80 362 43.07 3e-44 Zinc transporter 9 OS Oryza sativa subsp. japonica GN ZIP9 PE 3 SV 3
blastp_uniprot_sprot sp|Q7XLD4|ZIP3_ORYSJ 10 200 + 191 Gaps:17 55.49 364 44.55 6e-44 Zinc transporter 3 OS Oryza sativa subsp. japonica GN ZIP3 PE 1 SV 2
blastp_uniprot_sprot sp|Q75HB1|IRT1_ORYSJ 15 200 + 186 Gaps:15 48.93 374 45.90 8e-42 Fe(2+) transport protein 1 OS Oryza sativa subsp. japonica GN IRT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W245|ZIP10_ARATH 10 200 + 191 Gaps:21 55.49 364 40.10 2e-41 Probable zinc transporter 10 OS Arabidopsis thaliana GN ZIP10 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SLG3|ZIP3_ARATH 21 200 + 180 Gaps:24 46.02 339 50.00 3e-41 Zinc transporter 3 OS Arabidopsis thaliana GN ZIP3 PE 2 SV 1
blastp_uniprot_sprot sp|Q6L8G1|IRT2_ORYSJ 29 200 + 172 Gaps:14 48.11 370 44.94 5e-40 Fe(2+) transport protein 2 OS Oryza sativa subsp. japonica GN IRT2 PE 2 SV 1
rpsblast_cdd gnl|CDD|162055 22 200 + 179 Gaps:4 54.01 324 52.00 1e-55 TIGR00820 zip ZIP zinc/iron transport family. The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals plants and yeast. Theycomprise a diverse family with several paralogues in any one organism (e.g. at least five in Caenorabditis elegans at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins Zrt1 and Zrt2 both probably transport Zn2+ with high specificity but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+ and at least one transports a range of metal ions. The energy source fortransport has not been characterized but these systems probably function as secondary carriers.
rpsblast_cdd gnl|CDD|177818 1 200 + 200 Gaps:24 55.19 337 44.09 2e-40 PLN02159 PLN02159 Fe(2+) transport protein.
rpsblast_cdd gnl|CDD|202272 37 200 + 164 Gaps:9 54.46 314 29.24 2e-22 pfam02535 Zip ZIP Zinc transporter. The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product although this protein in not found within this family.
rpsblast_kog gnl|CDD|36771 23 200 + 178 Gaps:1 54.74 327 37.43 8e-40 KOG1558 KOG1558 KOG1558 Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism].

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 21 38 18 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 4 14 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 62 72 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 39 61 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 15 20 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 114 139 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 73 94 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 140 203 64 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 95 113 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 200 200 PTHR11040:SF28 none none none
PANTHER 1 200 200 PTHR11040 none none none
Pfam 38 178 141 PF02535 none ZIP Zinc transporter IPR003689

7 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 20 19
SignalP_GRAM_NEGATIVE 1 20 19
SignalP_EUK 1 20 19
TMHMM 74 96 22
TMHMM 5 24 19
TMHMM 39 61 22
TMHMM 116 138 22

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting