Protein : Qrob_P0398540.2 Q. robur
Protein Identifier  ? Qrob_P0398540.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=21) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED (PTHR11206:SF87) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 480  
Kegg Orthology  K03327
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102620467 3 470 + 468 none 98.73 474 74.79 0.0 MATE efflux family protein 7-like
blastp_kegg lcl|pper:PRUPE_ppa026002mg 4 472 + 469 none 98.12 478 74.84 0.0 hypothetical protein
blastp_kegg lcl|pmum:103328689 4 472 + 469 none 98.12 478 74.20 0.0 MATE efflux family protein 5
blastp_kegg lcl|rcu:RCOM_0466970 4 461 + 458 none 97.45 470 75.33 0.0 TRANSPARENT TESTA 12 protein putative
blastp_kegg lcl|mdm:103421944 5 472 + 468 none 97.50 480 71.79 0.0 MATE efflux family protein 5-like
blastp_kegg lcl|gmx:100808206 3 474 + 472 none 98.33 480 69.92 0.0 MATE efflux family protein DTX1-like
blastp_kegg lcl|gmx:100820234 3 474 + 472 none 98.33 480 69.92 0.0 MATE efflux family protein DTX1-like
blastp_kegg lcl|pop:POPTR_0229s00230g 3 472 + 470 none 98.95 475 73.40 0.0 hypothetical protein
blastp_kegg lcl|sot:102605221 6 462 + 457 none 97.03 471 70.46 0.0 MATE efflux family protein 5-like
blastp_kegg lcl|gmx:100776126 1 464 + 464 Gaps:2 97.26 475 70.78 0.0 MATE efflux family protein DTX1-like
blastp_pdb 3mku_B 17 432 + 416 Gaps:28 93.04 460 24.53 1e-17 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mku_A 17 432 + 416 Gaps:28 93.04 460 24.53 1e-17 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_B 17 432 + 416 Gaps:28 93.04 460 24.53 1e-17 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_A 17 432 + 416 Gaps:28 93.04 460 24.53 1e-17 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_uniprot_sprot sp|Q9SIA5|DTX1_ARATH 1 465 + 465 Gaps:2 97.27 476 54.00 8e-178 MATE efflux family protein DTX1 OS Arabidopsis thaliana GN DTX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RWF5|MATE9_ARATH 14 469 + 456 none 94.41 483 54.39 3e-176 MATE efflux family protein 9 OS Arabidopsis thaliana GN DTXL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GXM8|MATE7_ARATH 19 465 + 447 none 93.91 476 55.26 3e-176 MATE efflux family protein 7 OS Arabidopsis thaliana GN DTXL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA4|MATE5_ARATH 19 465 + 447 none 93.91 476 56.82 6e-175 MATE efflux family protein 5 OS Arabidopsis thaliana GN DTXL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SIA1|MATE8_ARATH 14 463 + 450 none 94.34 477 54.67 3e-173 MATE efflux family protein 8 OS Arabidopsis thaliana GN DTXL4 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SIA3|MATE6_ARATH 19 465 + 447 none 93.91 476 54.59 5e-169 MATE efflux family protein 6 OS Arabidopsis thaliana GN DTXL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q9LUH2|ALF5_ARATH 17 451 + 435 none 91.19 477 36.32 1e-89 MATE efflux family protein ALF5 OS Arabidopsis thaliana GN ALF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH3|LAL5_ARATH 17 451 + 435 none 92.75 469 35.86 2e-88 MATE efflux family protein LAL5 OS Arabidopsis thaliana GN LAL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LYT3|TT12_ARATH 17 471 + 455 Gaps:2 89.35 507 34.00 3e-83 Protein TRANSPARENT TESTA 12 OS Arabidopsis thaliana GN TT12 PE 2 SV 1
blastp_uniprot_sprot sp|Q8K0H1|S47A1_MOUSE 15 457 + 443 Gaps:2 77.78 567 31.29 1e-67 Multidrug and toxin extrusion protein 1 OS Mus musculus GN Slc47a1 PE 1 SV 2
rpsblast_cdd gnl|CDD|162043 29 369 + 341 Gaps:6 99.71 342 27.27 2e-48 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|30880 11 459 + 449 Gaps:8 98.68 455 24.28 7e-45 COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
rpsblast_cdd gnl|CDD|179333 16 442 + 427 Gaps:32 94.52 456 22.97 5e-26 PRK01766 PRK01766 multidrug efflux protein Reviewed.
rpsblast_cdd gnl|CDD|190033 29 413 + 385 Gaps:5 100.00 161 49.07 1e-22 pfam01554 MatE MatE. The MatE domain.
rpsblast_kog gnl|CDD|36561 1 462 + 462 Gaps:4 96.83 473 47.38 1e-122 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

30 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 419 423 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 49 53 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 450 479 30 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 250 412 163 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Pfam 29 189 161 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Phobius 1 25 25 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 424 449 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 383 393 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 301 320 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 142 160 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 192 202 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 321 348 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 79 98 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
TIGRFAM 29 426 398 TIGR00797 "Reactome:REACT_15518","Reactome:REACT_20633" matE: MATE efflux family protein IPR002528
Phobius 161 171 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 16 470 455 PTHR11206:SF87 none none none
Phobius 360 382 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 224 243 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 281 300 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 123 141 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 26 48 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 99 122 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 16 470 455 PTHR11206 none none none
Phobius 203 223 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 54 78 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 262 280 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 172 191 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 349 359 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 244 261 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 394 418 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

11 Localization

Analysis Start End Length
TMHMM 323 345 22
TMHMM 395 417 22
TMHMM 424 446 22
TMHMM 26 48 22
TMHMM 142 163 21
TMHMM 170 192 22
TMHMM 281 303 22
TMHMM 100 122 22
TMHMM 358 380 22
TMHMM 202 224 22
TMHMM 58 80 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting