Protein : Qrob_P0398270.2 Q. robur
Protein Identifier  ? Qrob_P0398270.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR31407:SF4 - PSBP-LIKE PROTEIN 1, CHLOROPLASTIC (PTHR31407:SF4) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 243  
Kegg Orthology  K02717
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0009523 photosystem II A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.
GO:0009654 photosystem II oxygen evolving complex A complex, composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins, that catalyzes the splitting of water to O2 and 4 H+. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ).
GO:0019898 extrinsic component of membrane The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa010690mg 1 242 + 242 Gaps:2 100.00 240 76.25 9e-132 hypothetical protein
blastp_kegg lcl|mdm:103434480 1 242 + 242 Gaps:2 99.17 242 75.00 9e-131 psbP-like protein 1 chloroplastic
blastp_kegg lcl|vvi:100259776 1 242 + 242 Gaps:8 100.00 238 75.21 3e-129 PSBP2 putative oxygen evolving enhancer protein
blastp_kegg lcl|pxb:103930010 1 242 + 242 Gaps:2 99.17 242 74.58 5e-129 psbP-like protein 1 chloroplastic
blastp_kegg lcl|pmum:103332599 1 242 + 242 Gaps:2 100.00 240 75.00 6e-129 psbP-like protein 1 chloroplastic
blastp_kegg lcl|rcu:RCOM_0190110 1 242 + 242 Gaps:6 100.00 242 73.55 1e-124 Thylakoid lumenal 25.6 kDa protein chloroplast precursor putative
blastp_kegg lcl|pxb:103948373 1 242 + 242 Gaps:2 99.17 242 72.92 2e-124 psbP-like protein 1 chloroplastic
blastp_kegg lcl|pxb:103928559 1 242 + 242 Gaps:9 99.20 249 71.66 2e-124 psbP-like protein 1 chloroplastic
blastp_kegg lcl|gmx:100305918 1 242 + 242 Gaps:6 100.00 236 75.00 3e-123 uncharacterized LOC100305918
blastp_kegg lcl|mdm:103434622 1 242 + 242 Gaps:9 99.20 249 71.26 3e-123 psbP-like protein 1 chloroplastic
blastp_pdb 2xb3_A 91 240 + 150 Gaps:11 96.36 165 38.99 5e-29 mol:protein length:165 PSBP PROTEIN
blastp_pdb 1v2b_B 100 239 + 140 Gaps:24 91.53 177 24.69 4e-06 mol:protein length:177 23-kDa polypeptide of photosystem II oxygen-e
blastp_pdb 1v2b_A 100 239 + 140 Gaps:24 91.53 177 24.69 4e-06 mol:protein length:177 23-kDa polypeptide of photosystem II oxygen-e
blastp_uniprot_sprot sp|P82538|PPL1_ARATH 25 239 + 215 Gaps:2 92.61 230 64.79 3e-97 PsbP-like protein 1 chloroplastic OS Arabidopsis thaliana GN PPL1 PE 1 SV 1
blastp_uniprot_sprot sp|O80634|PPL2_ARATH 31 242 + 212 Gaps:14 86.55 238 35.44 8e-38 PsbP-like protein 2 chloroplastic OS Arabidopsis thaliana GN PPL2 PE 1 SV 2
blastp_uniprot_sprot sp|F4J7A7|PPD7_ARATH 60 241 + 182 Gaps:49 80.36 280 25.33 3e-09 PsbP domain-containing protein 7 chloroplastic OS Arabidopsis thaliana GN PPD7 PE 2 SV 1
blastp_uniprot_sprot sp|O23403|PPD1_ARATH 60 239 + 180 Gaps:29 72.13 287 24.15 2e-08 PsbP domain-containing protein 1 chloroplastic OS Arabidopsis thaliana GN PPD1 PE 1 SV 1
blastp_uniprot_sprot sp|P82715|PPD5_ARATH 50 240 + 191 Gaps:56 80.47 297 25.10 8e-08 PsbP domain-containing protein 5 chloroplastic OS Arabidopsis thaliana GN PPD5 PE 1 SV 3
blastp_uniprot_sprot sp|P82537|TL1X_SPIOL 86 115 + 30 none 100.00 30 70.00 3e-07 Thylakoid lumenal 17 kDa protein (Fragment) OS Spinacia oleracea PE 1 SV 1
blastp_uniprot_sprot sp|O49080|PSBP_FRIAG 66 230 + 165 Gaps:25 70.45 264 26.88 9e-07 Oxygen-evolving enhancer protein 2 chloroplastic OS Fritillaria agrestis GN PSBP PE 2 SV 1
blastp_uniprot_sprot sp|Q40407|PSBP_NARPS 100 230 + 131 Gaps:21 57.36 265 25.00 1e-06 Oxygen-evolving enhancer protein 2 chloroplastic OS Narcissus pseudonarcissus GN PSBP PE 2 SV 1
blastp_uniprot_sprot sp|Q9SLQ8|PSBP_CUCSA 100 230 + 131 Gaps:21 57.79 263 25.66 6e-06 Oxygen-evolving enhancer protein 2 chloroplastic OS Cucumis sativus GN PSBP PE 2 SV 1
blastp_uniprot_sprot sp|Q04127|PSBP3_TOBAC 100 239 + 140 Gaps:24 60.90 266 24.69 8e-06 Oxygen-evolving enhancer protein 2-3 chloroplastic OS Nicotiana tabacum GN PSBP3 PE 2 SV 1
rpsblast_cdd gnl|CDD|201975 83 240 + 158 Gaps:5 100.00 163 42.33 5e-52 pfam01789 PsbP PsbP. This family consists of the 23 kDa subunit of oxygen evolving system of photosystem II or PsbP from various plants (where it is encoded by the nuclear genome) and Cyanobacteria. The 23 KDa PsbP protein is required for PSII to be fully operational in vivo it increases the affinity of the water oxidation site for Cl- and provides the conditions required for high affinity binding of Ca2+.
rpsblast_cdd gnl|CDD|177696 33 239 + 207 Gaps:53 80.92 262 25.94 8e-09 PLN00066 PLN00066 PsbP domain-containing protein 4 Provisional.
rpsblast_cdd gnl|CDD|177690 60 239 + 180 Gaps:29 72.38 286 23.67 1e-07 PLN00059 PLN00059 PsbP domain-containing protein 1 Provisional.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 87 239 153 G3DSA:3.40.1000.10 none none IPR016123
PANTHER 34 242 209 PTHR31407:SF4 none none none
Pfam 77 239 163 PF01789 none PsbP IPR002683
PANTHER 34 242 209 PTHR31407 none none none
SUPERFAMILY 95 239 145 SSF55724 none none IPR016123

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9

0 Targeting