Protein : Qrob_P0391830.2 Q. robur
Protein Identifier  ? Qrob_P0391830.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=21) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED (PTHR11206:SF87) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 389  
Kegg Orthology  K03327
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102621442 1 386 + 386 none 77.67 497 80.57 0.0 MATE efflux family protein 5-like
blastp_kegg lcl|cic:CICLE_v10015022mg 1 386 + 386 none 78.30 493 80.57 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0275330 1 382 + 382 none 78.76 485 80.89 0.0 TRANSPARENT TESTA 12 protein putative
blastp_kegg lcl|mdm:103402629 1 386 + 386 none 78.62 491 80.31 0.0 MATE efflux family protein 5-like
blastp_kegg lcl|pmum:103341676 1 379 + 379 none 77.03 492 81.53 0.0 MATE efflux family protein 5-like
blastp_kegg lcl|fve:101308290 1 388 + 388 none 78.70 493 78.61 0.0 MATE efflux family protein DTX1-like
blastp_kegg lcl|mtr:MTR_1g108810 1 376 + 376 none 77.69 484 78.72 0.0 Protein TRANSPARENT TESTA
blastp_kegg lcl|pop:POPTR_0010s12690g 1 376 + 376 Gaps:1 77.96 481 80.27 0.0 POPTRDRAFT_886050 hypothetical protein
blastp_kegg lcl|sot:102597685 1 382 + 382 none 78.76 485 77.49 0.0 MATE efflux family protein 5-like
blastp_kegg lcl|cam:101500523 1 386 + 386 none 78.62 491 75.65 0.0 MATE efflux family protein 5-like
blastp_pdb 3mku_B 4 358 + 355 Gaps:13 79.13 460 24.45 8e-26 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mku_A 4 358 + 355 Gaps:13 79.13 460 24.45 8e-26 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_B 4 358 + 355 Gaps:13 79.13 460 24.45 8e-26 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_A 4 358 + 355 Gaps:13 79.13 460 24.45 8e-26 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_uniprot_sprot sp|Q9SIA3|MATE6_ARATH 4 382 + 379 none 79.62 476 44.85 4e-103 MATE efflux family protein 6 OS Arabidopsis thaliana GN DTXL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q8RWF5|MATE9_ARATH 1 379 + 379 none 78.47 483 44.33 2e-102 MATE efflux family protein 9 OS Arabidopsis thaliana GN DTXL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA5|DTX1_ARATH 4 382 + 379 none 79.62 476 45.12 6e-102 MATE efflux family protein DTX1 OS Arabidopsis thaliana GN DTX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA1|MATE8_ARATH 4 386 + 383 Gaps:4 79.45 477 45.12 5e-100 MATE efflux family protein 8 OS Arabidopsis thaliana GN DTXL4 PE 3 SV 2
blastp_uniprot_sprot sp|Q8GXM8|MATE7_ARATH 4 382 + 379 none 79.62 476 44.06 7e-99 MATE efflux family protein 7 OS Arabidopsis thaliana GN DTXL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA4|MATE5_ARATH 1 382 + 382 none 80.25 476 44.24 6e-98 MATE efflux family protein 5 OS Arabidopsis thaliana GN DTXL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LUH2|ALF5_ARATH 1 375 + 375 none 78.62 477 42.40 7e-94 MATE efflux family protein ALF5 OS Arabidopsis thaliana GN ALF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH3|LAL5_ARATH 1 375 + 375 none 79.96 469 41.60 2e-93 MATE efflux family protein LAL5 OS Arabidopsis thaliana GN LAL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LYT3|TT12_ARATH 1 386 + 386 Gaps:4 76.92 507 38.97 9e-83 Protein TRANSPARENT TESTA 12 OS Arabidopsis thaliana GN TT12 PE 2 SV 1
blastp_uniprot_sprot sp|Q10085|YAO6_SCHPO 3 381 + 379 Gaps:16 82.42 455 32.80 3e-56 Uncharacterized transporter C11D3.06 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC11D3.06 PE 3 SV 1
rpsblast_cdd gnl|CDD|162043 1 294 + 294 Gaps:5 86.26 342 30.51 2e-45 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|30880 1 379 + 379 Gaps:7 83.52 455 26.05 5e-36 COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
rpsblast_cdd gnl|CDD|179333 4 365 + 362 Gaps:23 80.48 456 26.70 5e-29 PRK01766 PRK01766 multidrug efflux protein Reviewed.
rpsblast_cdd gnl|CDD|190033 1 337 + 337 Gaps:4 100.00 161 44.72 4e-17 pfam01554 MatE MatE. The MatE domain.
rpsblast_cdd gnl|CDD|166843 3 365 + 363 Gaps:13 80.17 464 24.46 1e-13 PRK00187 PRK00187 multidrug efflux protein NorA Provisional.
rpsblast_kog gnl|CDD|36561 1 379 + 379 Gaps:2 79.70 473 44.56 3e-98 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 1 350 350 TIGR00797 "Reactome:REACT_15518","Reactome:REACT_20633" matE: MATE efflux family protein IPR002528
Phobius 165 184 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 347 370 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 342 346 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 379 379 PTHR11206 none none none
Phobius 205 227 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 174 336 163 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Pfam 1 113 113 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Phobius 247 268 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 65 87 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 27 27 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 93 115 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 185 204 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 371 388 18 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 28 53 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 88 92 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 116 126 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 379 379 PTHR11206:SF87 none none none
Phobius 321 341 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 146 164 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 127 145 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 54 64 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 269 320 52 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 228 246 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

8 Localization

Analysis Start End Length
TMHMM 204 226 22
TMHMM 246 268 22
TMHMM 347 369 22
TMHMM 93 115 22
TMHMM 175 197 22
TMHMM 122 144 22
TMHMM 320 342 22
TMHMM 30 52 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting