Protein : Qrob_P0390080.2 Q. robur
Protein Identifier  ? Qrob_P0390080.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=34) K15032 - mTERF domain-containing protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 384  
Kegg Orthology  K15032
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007097mg 1 383 + 383 Gaps:3 100.00 382 65.97 1e-178 hypothetical protein
blastp_kegg lcl|pmum:103325722 1 383 + 383 Gaps:3 100.00 382 65.97 4e-178 uncharacterized LOC103325722
blastp_kegg lcl|mdm:103445863 5 383 + 379 Gaps:1 98.70 385 63.68 7e-174 uncharacterized LOC103445863
blastp_kegg lcl|pxb:103933738 5 383 + 379 Gaps:1 98.70 385 64.47 9e-174 uncharacterized LOC103933738
blastp_kegg lcl|rcu:RCOM_1574760 4 383 + 380 Gaps:3 99.74 384 65.01 8e-173 hypothetical protein
blastp_kegg lcl|mdm:103445862 12 383 + 372 Gaps:1 97.63 380 63.34 1e-165 uncharacterized LOC103445862
blastp_kegg lcl|fve:101301828 38 383 + 346 none 91.05 380 65.03 2e-165 uncharacterized protein LOC101301828
blastp_kegg lcl|pxb:103933739 12 383 + 372 Gaps:1 97.63 380 63.34 6e-165 uncharacterized LOC103933739
blastp_kegg lcl|pmum:103325790 12 383 + 372 none 97.64 381 62.10 1e-163 uncharacterized LOC103325790
blastp_kegg lcl|pper:PRUPE_ppa024122mg 12 383 + 372 none 97.64 381 61.56 1e-162 hypothetical protein
rpsblast_cdd gnl|CDD|202273 70 342 + 273 Gaps:44 100.00 345 29.86 2e-40 pfam02536 mTERF mTERF. This family contains one sequence of known function Human mitochondrial transcription termination factor (mTERF) the rest of the family consists of hypothetical proteins none of which have any functional information. mTERF is a multizipper protein possessing three putative leucine zippers one of which is bipartite. The protein binds DNA as a monomer. The leucine zippers are not implicated in a dimerisation role as in other leucine zippers.
rpsblast_kog gnl|CDD|36481 56 367 + 312 Gaps:7 76.27 413 20.32 9e-23 KOG1267 KOG1267 KOG1267 Mitochondrial transcription termination factor mTERF [Transcription General function prediction only].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 69 342 274 PF02536 none mTERF IPR003690
SMART 151 182 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 255 286 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 287 318 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 80 110 31 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 219 250 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 115 146 32 SM00733 none Mitochondrial termination factor repeats IPR003690
PANTHER 64 375 312 PTHR13068 none none none
PANTHER 64 375 312 PTHR13068:SF15 none none none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting