Protein : Qrob_P0389910.2 Q. robur
Protein Identifier  ? Qrob_P0389910.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=23) K14709 - solute carrier family 39 (zinc transporter), member 1/2/3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 305  
Kegg Orthology  K14709
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0046873 metal ion transmembrane transporter activity Enables the transfer of metal ions from one side of a membrane to the other.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102627766 1 304 + 304 Gaps:59 100.00 355 64.51 5e-151 zinc transporter 8-like
blastp_kegg lcl|rcu:RCOM_1247260 19 304 + 286 Gaps:60 95.77 355 60.88 5e-136 zinc/iron transporter putative (EC:1.3.1.74)
blastp_kegg lcl|tcc:TCM_002136 4 304 + 301 Gaps:52 98.87 355 65.53 2e-135 Zinc transporter 5 precursor
blastp_kegg lcl|rcu:RCOM_0122460 8 304 + 297 Gaps:56 97.21 359 57.88 2e-134 zinc/iron transporter putative (EC:1.3.1.74)
blastp_kegg lcl|sot:102600170 1 304 + 304 Gaps:61 100.00 343 59.18 3e-134 zinc transporter 5-like
blastp_kegg lcl|cam:101491996 14 304 + 291 Gaps:54 95.47 353 59.05 5e-134 zinc transporter 5-like
blastp_kegg lcl|pmum:103328995 23 304 + 282 Gaps:59 93.54 356 66.37 5e-134 zinc transporter 8-like
blastp_kegg lcl|cic:CICLE_v10011940mg 1 304 + 304 Gaps:59 91.49 388 63.10 1e-133 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s00860g 9 304 + 296 Gaps:60 97.74 354 63.01 3e-133 POPTRDRAFT_418240 zinc transporter protein ZIP1
blastp_kegg lcl|cit:102627464 1 304 + 304 Gaps:62 100.00 358 63.13 5e-133 zinc transporter 8-like
blastp_uniprot_sprot sp|O81123|ZIP1_ARATH 13 304 + 292 Gaps:48 95.77 355 49.41 2e-101 Zinc transporter 1 OS Arabidopsis thaliana GN ZIP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6L8G0|ZIP5_ORYSJ 7 304 + 298 Gaps:55 97.17 353 46.06 1e-97 Zinc transporter 5 OS Oryza sativa subsp. japonica GN ZIP5 PE 2 SV 1
blastp_uniprot_sprot sp|O23039|ZIP5_ARATH 26 304 + 279 Gaps:63 91.67 360 49.70 2e-96 Zinc transporter 5 OS Arabidopsis thaliana GN ZIP5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SLG3|ZIP3_ARATH 3 304 + 302 Gaps:38 99.12 339 48.21 4e-90 Zinc transporter 3 OS Arabidopsis thaliana GN ZIP3 PE 2 SV 1
blastp_uniprot_sprot sp|Q0DHE3|ZIP9_ORYSJ 13 304 + 292 Gaps:69 97.51 362 44.19 2e-80 Zinc transporter 9 OS Oryza sativa subsp. japonica GN ZIP9 PE 3 SV 3
blastp_uniprot_sprot sp|Q8W245|ZIP10_ARATH 25 304 + 280 Gaps:52 91.21 364 41.27 5e-80 Probable zinc transporter 10 OS Arabidopsis thaliana GN ZIP10 PE 1 SV 2
blastp_uniprot_sprot sp|Q7XLD4|ZIP3_ORYSJ 1 304 + 304 Gaps:64 100.00 364 42.86 3e-79 Zinc transporter 3 OS Oryza sativa subsp. japonica GN ZIP3 PE 1 SV 2
blastp_uniprot_sprot sp|Q75HB1|IRT1_ORYSJ 19 304 + 286 Gaps:58 88.77 374 41.87 4e-76 Fe(2+) transport protein 1 OS Oryza sativa subsp. japonica GN IRT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6L8G1|IRT2_ORYSJ 33 304 + 272 Gaps:67 88.38 370 40.06 6e-75 Fe(2+) transport protein 2 OS Oryza sativa subsp. japonica GN IRT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIS2|ZIP12_ARATH 1 304 + 304 Gaps:67 100.00 355 42.54 2e-72 Probable zinc transporter 12 OS Arabidopsis thaliana GN ZIP12 PE 3 SV 1
rpsblast_cdd gnl|CDD|162055 28 304 + 277 Gaps:57 100.00 324 50.62 2e-93 TIGR00820 zip ZIP zinc/iron transport family. The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals plants and yeast. Theycomprise a diverse family with several paralogues in any one organism (e.g. at least five in Caenorabditis elegans at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins Zrt1 and Zrt2 both probably transport Zn2+ with high specificity but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+ and at least one transports a range of metal ions. The energy source fortransport has not been characterized but these systems probably function as secondary carriers.
rpsblast_cdd gnl|CDD|177818 7 304 + 298 Gaps:78 99.70 337 41.67 7e-65 PLN02159 PLN02159 Fe(2+) transport protein.
rpsblast_cdd gnl|CDD|202272 41 301 + 261 Gaps:61 100.00 314 30.57 3e-41 pfam02535 Zip ZIP Zinc transporter. The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product although this protein in not found within this family.
rpsblast_kog gnl|CDD|36771 27 304 + 278 Gaps:52 99.69 327 38.96 2e-63 KOG1558 KOG1558 KOG1558 Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism].

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 237 247 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 99 117 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 140 210 71 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 248 272 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 19 24 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 66 76 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 43 65 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 284 303 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 273 283 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 304 304 1 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 211 236 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 201 301 101 PF02535 none ZIP Zinc transporter IPR003689
Pfam 42 182 141 PF02535 none ZIP Zinc transporter IPR003689
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 118 139 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 24 304 281 PTHR11040:SF35 none none none
PANTHER 24 304 281 PTHR11040 none none none
Phobius 25 42 18 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 77 98 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

10 Localization

Analysis Start End Length
TMHMM 46 65 19
TMHMM 77 99 22
TMHMM 7 24 17
SignalP_GRAM_POSITIVE 1 24 23
TMHMM 284 301 17
TMHMM 242 264 22
SignalP_EUK 1 24 23
TMHMM 210 232 22
SignalP_GRAM_NEGATIVE 1 24 23
TMHMM 119 141 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting