Protein : Qrob_P0380250.2 Q. robur
Protein Identifier  ? Qrob_P0380250.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=15) KOG4768 - Mitochondrial mRNA maturase [RNA processing and modification]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 203  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006397 mRNA processing Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100264128 1 185 + 185 Gaps:1 26.02 757 72.59 1e-63 putative COX1/OXI3 intron 2 protein-like
blastp_kegg lcl|cit:102607317 1 185 + 185 Gaps:1 24.25 800 75.26 1e-63 uncharacterized LOC102607317
blastp_kegg lcl|tcc:TCM_033550 1 191 + 191 Gaps:1 27.07 750 70.44 4e-62 RNA-directed DNA polymerase
blastp_kegg lcl|fve:101298146 1 200 + 200 Gaps:3 26.24 804 68.72 5e-62 uncharacterized protein LOC101298146
blastp_kegg lcl|mdm:103448365 2 191 + 190 Gaps:1 25.98 766 71.86 5e-61 uncharacterized LOC103448365
blastp_kegg lcl|rcu:RCOM_0160820 1 187 + 187 Gaps:3 26.23 751 73.60 3e-60 RNA binding protein putative
blastp_kegg lcl|gmx:100812449 1 185 + 185 Gaps:1 27.13 726 67.01 8e-58 uncharacterized LOC100812449
blastp_kegg lcl|gmx:100817946 1 185 + 185 Gaps:1 26.91 732 65.99 7e-57 uncharacterized LOC100817946
blastp_kegg lcl|pda:103712607 1 185 + 185 Gaps:1 26.17 745 64.62 7e-56 uncharacterized LOC103712607
blastp_kegg lcl|brp:103847334 1 185 + 185 Gaps:2 26.76 751 66.67 1e-55 uncharacterized LOC103847334
rpsblast_cdd gnl|CDD|110356 49 122 + 74 Gaps:2 52.11 142 31.08 2e-08 pfam01348 Intron_maturas2 Type II intron maturase. Group II introns use intron-encoded reverse transcriptase maturase and DNA endonuclease activities for site-specific insertion into DNA. Although this type of intron is self splicing in vitro they require a maturase protein for splicing in vivo. It has been shown that a specific region of the aI2 intron is needed for the maturase function. This region was found to be conserved in group II introns and called domain X.
rpsblast_kog gnl|CDD|39965 47 180 + 134 Gaps:5 16.71 796 23.31 2e-07 KOG4768 KOG4768 KOG4768 Mitochondrial mRNA maturase [RNA processing and modification].

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 55 119 65 PF01348 none Type II intron maturase IPR024937

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting