Protein : Qrob_P0375640.2 Q. robur
Protein Identifier  ? Qrob_P0375640.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR12652:SF17 - PEROXISOMAL MEMBRANE PROTEIN 11B (PTHR12652:SF17) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 227  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005779 integral component of peroxisomal membrane The component of the peroxisomal membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0016559 peroxisome fission The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_014921 3 226 + 224 Gaps:1 99.56 226 88.00 2e-145 Peroxisomal membrane protein 11B
blastp_kegg lcl|pper:PRUPE_ppa022507mg 1 226 + 226 Gaps:1 100.00 227 85.90 2e-141 hypothetical protein
blastp_kegg lcl|vvi:100260413 3 226 + 224 Gaps:2 99.56 227 84.07 2e-139 peroxisomal membrane protein 11-4-like
blastp_kegg lcl|pmum:103333360 1 226 + 226 Gaps:2 100.00 228 85.53 3e-139 peroxisomal membrane protein 11B
blastp_kegg lcl|mdm:103417821 3 226 + 224 Gaps:1 99.56 226 83.56 5e-139 peroxisomal membrane protein 11B-like
blastp_kegg lcl|rcu:RCOM_1500450 3 226 + 224 Gaps:1 99.56 226 83.11 5e-139 peroxisomal biogenesis factor putative
blastp_kegg lcl|mdm:103439284 3 226 + 224 Gaps:1 99.56 226 83.56 7e-139 peroxisomal membrane protein 11B-like
blastp_kegg lcl|csv:101212661 3 226 + 224 Gaps:2 99.56 227 83.19 1e-138 peroxisomal membrane protein 11-4-like
blastp_kegg lcl|pxb:103932663 3 226 + 224 Gaps:1 99.56 226 83.11 2e-138 peroxisomal membrane protein 11B-like
blastp_kegg lcl|pxb:103963390 3 226 + 224 Gaps:1 99.56 226 83.11 2e-138 peroxisomal membrane protein 11B-like
blastp_uniprot_sprot sp|Q7XU74|PX114_ORYSJ 3 226 + 224 Gaps:5 98.65 222 75.80 3e-119 Peroxisomal membrane protein 11-4 OS Oryza sativa subsp. japonica GN PEX11-4 PE 2 SV 2
blastp_uniprot_sprot sp|Q01IH3|PX114_ORYSI 3 226 + 224 Gaps:5 98.65 222 75.80 3e-119 Peroxisomal membrane protein 11-4 OS Oryza sativa subsp. indica GN PEX11-4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9STY0|PX11B_ARATH 1 226 + 226 Gaps:1 100.00 227 73.57 4e-114 Peroxisomal membrane protein 11B OS Arabidopsis thaliana GN PEX11B PE 1 SV 1
blastp_uniprot_sprot sp|Q10MN2|PX113_ORYSJ 12 226 + 215 Gaps:7 86.78 242 32.86 3e-28 Peroxisomal membrane protein 11-3 OS Oryza sativa subsp. japonica GN PEX11-3 PE 2 SV 1
blastp_uniprot_sprot sp|A2XFQ8|PX113_ORYSI 12 226 + 215 Gaps:7 86.78 242 32.86 3e-28 Peroxisomal membrane protein 11-3 OS Oryza sativa subsp. indica GN PEX11-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FZF1|PX11A_ARATH 4 226 + 223 Gaps:11 93.55 248 30.17 3e-23 Peroxisomal membrane protein 11A OS Arabidopsis thaliana GN PEX11A PE 1 SV 1
blastp_uniprot_sprot sp|Q10MN3|PX112_ORYSJ 4 226 + 223 Gaps:17 89.76 254 28.51 7e-18 Peroxisomal membrane protein 11-2 OS Oryza sativa subsp. japonica GN PEX11-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q54H86|PEX11_DICDI 3 225 + 223 Gaps:26 95.67 254 27.16 9e-15 Peroxisomal membrane protein 11 homolog OS Dictyostelium discoideum GN pex11 PE 3 SV 1
blastp_uniprot_sprot sp|Q10SM7|PX111_ORYSJ 9 226 + 218 Gaps:19 90.72 237 24.65 1e-07 Peroxisomal membrane protein 11-1 OS Oryza sativa subsp. japonica GN PEX11-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5VRJ8|PX115_ORYSJ 9 226 + 218 Gaps:15 92.27 233 22.33 1e-06 Peroxisomal membrane protein 11-5 OS Oryza sativa subsp. japonica GN PEX11-5 PE 2 SV 1
rpsblast_cdd gnl|CDD|191332 6 224 + 219 Gaps:10 100.00 225 32.89 2e-51 pfam05648 PEX11 Peroxisomal biogenesis factor 11 (PEX11). This family consists of several peroxisomal biogenesis factor 11 (PEX11) proteins from several eukaryotic species. The PEX11 peroxisomal membrane proteins promote peroxisome division in multiple eukaryotes.
rpsblast_kog gnl|CDD|39388 6 226 + 221 Gaps:7 97.85 233 31.58 1e-46 KOG4186 KOG4186 KOG4186 Peroxisomal biogenesis protein (peroxin) [Intracellular trafficking secretion and vesicular transport].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 154 175 22 Coil none none none
Pfam 6 224 219 PF05648 none Peroxisomal biogenesis factor 11 (PEX11) IPR008733
Phobius 84 101 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 83 83 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 121 144 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 145 226 82 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 4 226 223 PTHR12652:SF17 none none none
Phobius 102 120 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 4 226 223 PTHR12652 none none none

2 Localization

Analysis Start End Length
TMHMM 121 143 22
TMHMM 84 106 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting