Protein : Qrob_P0372480.2 Q. robur
Protein Identifier  ? Qrob_P0372480.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=9) 2.4.2.1 - Purine-nucleoside phosphorylase. Code Enzyme  EC:2.4.2.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 450  
Kegg Orthology  K07375
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0007017 microtubule-based process Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0043234 protein complex A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
GO:0051258 protein polymerization The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.
GO:0005874 microtubule Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
GO:0005200 structural constituent of cytoskeleton The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103333214 1 446 + 446 none 99.78 447 99.55 0.0 tubulin beta-1 chain
blastp_kegg lcl|pper:PRUPE_ppa005698mg 1 446 + 446 none 99.78 447 99.55 0.0 hypothetical protein
blastp_kegg lcl|pxb:103934928 1 446 + 446 none 99.78 447 99.33 0.0 tubulin beta-1 chain
blastp_kegg lcl|pxb:103932202 1 446 + 446 none 99.78 447 99.33 0.0 tubulin beta-1 chain
blastp_kegg lcl|pxb:103960568 1 446 + 446 none 99.78 447 99.33 0.0 tubulin beta-1 chain
blastp_kegg lcl|mdm:103440575 1 446 + 446 none 99.78 447 99.10 0.0 tubulin beta-1 chain
blastp_kegg lcl|cam:101495326 1 447 + 447 none 99.78 448 98.88 0.0 tubulin beta-1 chain-like
blastp_kegg lcl|mdm:103439762 1 446 + 446 none 99.78 447 99.10 0.0 tubulin beta-1 chain-like
blastp_kegg lcl|mtr:MTR_1g101130 1 449 + 449 none 100.00 449 98.66 0.0 Tubulin beta chain
blastp_kegg lcl|fve:101292553 1 446 + 446 none 99.78 447 99.10 0.0 tubulin beta-1 chain-like isoform 1
blastp_pdb 1z2b_D 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 1z2b_B 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3n2k_D 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3n2k_B 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3n2g_D 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3n2g_B 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3hke_D 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3hke_B 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3hkd_D 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3hkd_B 1 430 + 430 none 96.63 445 86.51 0.0 mol:protein length:445 Tubulin beta chain
blastp_uniprot_sprot sp|P37392|TBB1_LUPAL 1 446 + 446 none 99.78 447 98.88 0.0 Tubulin beta-1 chain OS Lupinus albus GN TUBB1 PE 1 SV 1
blastp_uniprot_sprot sp|Q40106|TBB2_LUPAL 1 447 + 447 none 99.78 448 98.21 0.0 Tubulin beta-2 chain OS Lupinus albus GN TUBB2 PE 3 SV 1
blastp_uniprot_sprot sp|P29516|TBB8_ARATH 1 447 + 447 Gaps:2 100.00 449 98.00 0.0 Tubulin beta-8 chain OS Arabidopsis thaliana GN TUBB8 PE 2 SV 2
blastp_uniprot_sprot sp|Q8H7U1|TBB2_ORYSJ 1 442 + 442 Gaps:1 98.66 447 97.51 0.0 Tubulin beta-2 chain OS Oryza sativa subsp. japonica GN TUBB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZPN9|TBB2_ELEIN 1 448 + 448 Gaps:1 99.78 448 96.42 0.0 Tubulin beta-2 chain OS Eleusine indica GN TUBB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6VAF4|TBB9_GOSHI 1 446 + 446 Gaps:2 99.78 445 96.40 0.0 Tubulin beta-9 chain OS Gossypium hirsutum PE 2 SV 1
blastp_uniprot_sprot sp|P18025|TBB1_MAIZE 1 442 + 442 Gaps:1 98.88 446 97.28 0.0 Tubulin beta-1 chain OS Zea mays GN TUBB1 PE 1 SV 1
blastp_uniprot_sprot sp|P12460|TBB2_SOYBN 1 442 + 442 none 98.44 449 96.61 0.0 Tubulin beta-2 chain OS Glycine max GN TUBB2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ASR0|TBB3_ARATH 1 430 + 430 none 95.56 450 97.91 0.0 Tubulin beta-3 chain OS Arabidopsis thaliana GN TUBB3 PE 2 SV 2
blastp_uniprot_sprot sp|Q56YW9|TBB2_ARATH 1 430 + 430 none 95.56 450 97.91 0.0 Tubulin beta-2 chain OS Arabidopsis thaliana GN TUBB2 PE 2 SV 2

36 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 1 243 243 SSF52490 none none IPR003008
SMART 47 244 198 SM00864 none Tubulin/FtsZ family, GTPase domain IPR003008
PANTHER 1 441 441 PTHR11588:SF66 none none none
Pfam 3 222 220 PF00091 none Tubulin/FtsZ family, GTPase domain IPR003008
Coils 408 429 22 Coil none none none
ProSitePatterns 1 4 4 PS00228 "Reactome:REACT_152" Tubulin-beta mRNA autoregulation signal. IPR013838
PRINTS 93 104 12 PR01161 none Tubulin signature IPR000217
PRINTS 10 30 21 PR01161 none Tubulin signature IPR000217
PRINTS 51 70 20 PR01161 none Tubulin signature IPR000217
PRINTS 132 150 19 PR01161 none Tubulin signature IPR000217
PRINTS 190 210 21 PR01161 none Tubulin signature IPR000217
PRINTS 151 172 22 PR01161 none Tubulin signature IPR000217
PRINTS 106 130 25 PR01161 none Tubulin signature IPR000217
PRINTS 176 189 14 PR01161 none Tubulin signature IPR000217
PRINTS 370 398 29 PR01161 none Tubulin signature IPR000217
PANTHER 1 441 441 PTHR11588 none none IPR000217
Gene3D 374 430 57 G3DSA:1.10.287.600 none none IPR023123
ProSitePatterns 140 146 7 PS00227 none Tubulin subunits alpha, beta, and gamma signature. IPR017975
SMART 246 383 138 SM00865 none Tubulin/FtsZ family, C-terminal domain IPR018316
SUPERFAMILY 244 429 186 SSF55307 none none IPR008280
PRINTS 329 343 15 PR01163 none Beta-tubulin signature IPR002453
PRINTS 377 388 12 PR01163 none Beta-tubulin signature IPR002453
PRINTS 152 164 13 PR01163 none Beta-tubulin signature IPR002453
PRINTS 41 58 18 PR01163 none Beta-tubulin signature IPR002453
PRINTS 212 224 13 PR01163 none Beta-tubulin signature IPR002453
PRINTS 265 281 17 PR01163 none Beta-tubulin signature IPR002453
PRINTS 412 430 19 PR01163 none Beta-tubulin signature IPR002453
PRINTS 245 258 14 PR01163 none Beta-tubulin signature IPR002453
PRINTS 230 239 10 PR01163 none Beta-tubulin signature IPR002453
PRINTS 347 370 24 PR01163 none Beta-tubulin signature IPR002453

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4

0 Targeting