Protein : Qrob_P0369660.2 Q. robur
Protein Identifier  ? Qrob_P0369660.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=5) PTHR11453 - ANION EXCHANGE PROTEIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 675  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005452 inorganic anion exchanger activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion A(out) + inorganic anion B(in) = inorganic anion A(in) + inorganic anion B(out).
GO:0006820 anion transport The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_038366 1 670 + 670 Gaps:28 98.20 666 79.66 0.0 HCO3- transporter family
blastp_kegg lcl|pop:POPTR_0018s01350g 1 670 + 670 Gaps:30 98.20 666 77.98 0.0 POPTRDRAFT_809099 hypothetical protein
blastp_kegg lcl|vvi:100247413 1 670 + 670 Gaps:28 97.76 669 76.61 0.0 boron transporter 4-like
blastp_kegg lcl|cam:101514693 7 670 + 664 Gaps:24 96.41 668 77.02 0.0 probable boron transporter 7-like
blastp_kegg lcl|cmo:103488278 6 670 + 665 Gaps:25 95.83 672 77.95 0.0 probable boron transporter 6
blastp_kegg lcl|csv:101228053 6 670 + 665 Gaps:26 97.57 659 78.07 0.0 probable boron transporter 6-like
blastp_kegg lcl|csv:101220188 6 670 + 665 Gaps:26 97.57 659 78.07 0.0 probable boron transporter 6-like
blastp_kegg lcl|gmx:100792745 7 670 + 664 Gaps:30 97.71 655 77.34 0.0 boron transporter 4-like
blastp_kegg lcl|cit:102618735 1 670 + 670 Gaps:28 96.60 677 75.23 0.0 boron transporter 4-like
blastp_kegg lcl|gmx:100787412 7 667 + 661 Gaps:29 96.07 662 77.36 0.0 boron transporter 4-like
blastp_uniprot_sprot sp|Q9XI23|BOR4_ARATH 8 674 + 667 Gaps:40 95.31 683 70.05 0.0 Boron transporter 4 OS Arabidopsis thaliana GN BOR4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUU1|BOR7_ARATH 1 670 + 670 Gaps:35 98.22 673 70.05 0.0 Probable boron transporter 7 OS Arabidopsis thaliana GN BOR7 PE 2 SV 3
blastp_uniprot_sprot sp|Q3E954|BOR6_ARATH 7 671 + 665 Gaps:30 96.72 671 69.80 0.0 Probable boron transporter 6 OS Arabidopsis thaliana GN BOR6 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SSG5|BOR5_ARATH 5 674 + 670 Gaps:40 95.75 683 68.96 0.0 Putative boron transporter 5 OS Arabidopsis thaliana GN BOR5 PE 3 SV 1
blastp_uniprot_sprot sp|Q9M1P7|BOR2_ARATH 7 662 + 656 Gaps:42 90.75 703 60.19 0.0 Probable boron transporter 2 OS Arabidopsis thaliana GN BOR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYR7|BOR1_ARATH 7 662 + 656 Gaps:43 90.48 704 60.60 0.0 Boron transporter 1 OS Arabidopsis thaliana GN BOR1 PE 1 SV 1
blastp_uniprot_sprot sp|Q93Z13|BOR3_ARATH 7 662 + 656 Gaps:41 86.75 732 57.01 0.0 Probable boron transporter 3 OS Arabidopsis thaliana GN BOR3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9HGM6|YHW5_SCHPO 11 609 + 599 Gaps:116 95.36 517 31.85 2e-48 Putative transporter C543.05c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC543.05c PE 3 SV 1
blastp_uniprot_sprot sp|P53838|BOR1_YEAST 10 413 + 404 Gaps:48 63.19 576 32.97 7e-48 Boron transporter 1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN BOR1 PE 1 SV 1
blastp_uniprot_sprot sp|P04919|B3AT_MOUSE 8 610 + 603 Gaps:59 53.82 929 32.80 6e-30 Band 3 anion transport protein OS Mus musculus GN Slc4a1 PE 1 SV 1
rpsblast_cdd gnl|CDD|144522 5 558 + 554 Gaps:79 92.81 501 30.75 1e-36 pfam00955 HCO3_cotransp HCO3- transporter family. This family contains Band 3 anion exchange proteins that exchange CL-/HCO3-. This family also includes cotransporters of Na+/HCO3-.
rpsblast_cdd gnl|CDD|162058 5 610 + 606 Gaps:92 58.78 900 29.68 4e-36 TIGR00834 ae anion exchange protein. The Anion Exchanger (AE) Family (TC 2.A.31)Characterized protein members of the AE family are found only in animals.They preferentially catalyze anion exchange (antiport) reactions typically acting as HCO3-:Cl- antiporters but also transporting a range of other inorganic and organic anions. Additionally renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
rpsblast_kog gnl|CDD|36387 6 620 + 615 Gaps:50 60.96 876 43.63 1e-126 KOG1172 KOG1172 KOG1172 Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism].

27 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 108 127 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 234 252 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 454 670 217 PTHR11453:SF31 none none none
PANTHER 7 60 54 PTHR11453:SF31 none none none
PANTHER 81 388 308 PTHR11453:SF31 none none none
Pfam 219 390 172 PF00955 "Reactome:REACT_15518" HCO3- transporter family IPR011531
Pfam 468 557 90 PF00955 "Reactome:REACT_15518" HCO3- transporter family IPR011531
Pfam 6 201 196 PF00955 "Reactome:REACT_15518" HCO3- transporter family IPR011531
Phobius 273 308 36 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 18 57 40 G3DSA:1.10.287.570 none none none
Phobius 309 328 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 329 348 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 588 674 87 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 214 233 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 349 369 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 560 587 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 253 272 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 172 194 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 128 138 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 370 559 190 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 161 171 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 107 107 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 139 160 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 195 213 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 454 670 217 PTHR11453 "Reactome:REACT_15518";signature_desc=ANION EXCHANGE PROTEIN none IPR003020
PANTHER 7 60 54 PTHR11453 "Reactome:REACT_15518";signature_desc=ANION EXCHANGE PROTEIN none IPR003020
PANTHER 81 388 308 PTHR11453 "Reactome:REACT_15518";signature_desc=ANION EXCHANGE PROTEIN none IPR003020

9 Localization

Analysis Start End Length
TMHMM 349 371 22
TMHMM 309 328 19
TMHMM 138 160 22
TMHMM 481 503 22
TMHMM 172 190 18
TMHMM 247 269 22
TMHMM 101 123 22
TMHMM 560 582 22
TMHMM 212 234 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting