Protein : Qrob_P0367960.2 Q. robur
Protein Identifier  ? Qrob_P0367960.2 Organism . Name  Quercus robur
Score  13.2 Score Type  egn
Protein Description  (M=2) PTHR31042:SF2 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN (PTHR31042:SF2) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 332  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008375 acetylglucosaminyltransferase activity Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103324430 1 317 + 317 Gaps:65 98.18 385 49.74 7e-121 uncharacterized LOC103324430
blastp_kegg lcl|pper:PRUPE_ppa018994mg 1 317 + 317 Gaps:75 98.69 383 49.21 1e-118 hypothetical protein
blastp_kegg lcl|pxb:103938819 16 314 + 299 Gaps:74 92.75 400 52.56 1e-115 uncharacterized LOC103938819
blastp_kegg lcl|vvi:100262450 1 320 + 320 Gaps:68 99.47 380 48.68 2e-114 uncharacterized LOC100262450
blastp_kegg lcl|mdm:103419603 1 317 + 317 Gaps:68 97.94 389 49.61 8e-114 uncharacterized LOC103419603
blastp_kegg lcl|mdm:103434481 1 317 + 317 Gaps:68 97.94 389 49.61 8e-114 uncharacterized LOC103434481
blastp_kegg lcl|pmum:103329361 1 317 + 317 Gaps:64 99.21 380 50.13 1e-113 uncharacterized LOC103329361
blastp_kegg lcl|tcc:TCM_002123 1 321 + 321 Gaps:62 99.74 384 48.83 3e-113 Core-2/I-branching beta-1 6-N-acetylglucosaminyltransferase family protein isoform 3
blastp_kegg lcl|pxb:103948791 1 317 + 317 Gaps:69 98.71 387 49.74 4e-113 uncharacterized LOC103948791
blastp_kegg lcl|cic:CICLE_v10015649mg 4 317 + 314 Gaps:75 98.13 374 49.05 2e-110 hypothetical protein
rpsblast_cdd gnl|CDD|202252 102 263 + 162 Gaps:40 62.81 242 40.13 9e-29 pfam02485 Branch Core-2/I-Branching enzyme. This is a family of two different beta-1 6-N-acetylglucosaminyltransferase enzymes I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 12 34 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 35 331 297 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 60 304 245 PTHR31042 none none none
PANTHER 60 304 245 PTHR31042:SF2 none none none
Pfam 105 263 159 PF02485 none Core-2/I-Branching enzyme IPR003406

1 Localization

Analysis Start End Length
TMHMM 12 34 22

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting