Protein : Qrob_P0365830.2 Q. robur
Protein Identifier  ? Qrob_P0365830.2 Organism . Name  Quercus robur
Score  83.1 Score Type  egn
Protein Description  (M=7) K07300 - Ca2+:H+ antiporter Gene Prediction Quality  validated
Protein length 

Sequence

Length: 398  
Kegg Orthology  K07300
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006816 calcium ion transport The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0015369 calcium:proton antiporter activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in).

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100244138 1 381 + 381 Gaps:6 83.33 450 76.00 0.0 vacuolar cation/proton exchanger 5-like
blastp_kegg lcl|pmum:103329107 12 381 + 370 Gaps:9 78.49 465 75.62 0.0 vacuolar cation/proton exchanger 5-like
blastp_kegg lcl|cmo:103490425 1 381 + 381 Gaps:11 83.15 457 74.21 0.0 vacuolar cation/proton exchanger 3-like
blastp_kegg lcl|csv:101215915 1 381 + 381 Gaps:7 81.37 467 74.21 0.0 CAX6 vacuolar cation/proton exchanger 5-like
blastp_kegg lcl|mdm:103421712 5 381 + 377 Gaps:9 79.91 463 74.32 0.0 vacuolar cation/proton exchanger 3-like
blastp_kegg lcl|rcu:RCOM_1211410 1 381 + 381 Gaps:9 84.38 448 72.75 0.0 Vacuolar cation/proton exchanger putative
blastp_kegg lcl|pper:PRUPE_ppa005414mg 70 381 + 312 none 67.53 462 83.65 0.0 hypothetical protein
blastp_kegg lcl|pmum:103319295 14 381 + 368 Gaps:2 81.33 450 73.22 0.0 vacuolar cation/proton exchanger 5
blastp_kegg lcl|tcc:TCM_002509 7 381 + 375 Gaps:8 79.70 463 73.44 0.0 Vacuolar cation/proton exchanger 5
blastp_kegg lcl|fve:101295731 1 381 + 381 Gaps:27 84.06 483 65.27 0.0 vacuolar cation/proton exchanger 2-like
blastp_uniprot_sprot sp|Q39254|CAX2_ARATH 30 381 + 352 Gaps:9 79.59 441 70.37 1e-170 Vacuolar cation/proton exchanger 2 OS Arabidopsis thaliana GN CAX2 PE 1 SV 2
blastp_uniprot_sprot sp|Q8L783|CAX5_ARATH 14 381 + 368 Gaps:6 82.09 441 68.78 7e-167 Vacuolar cation/proton exchanger 5 OS Arabidopsis thaliana GN CAX5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LFZ8|CAX6_ARATH 17 381 + 365 Gaps:13 78.57 448 67.33 4e-155 Putative vacuolar cation/proton exchanger 6 OS Arabidopsis thaliana GN CAX6 PE 3 SV 3
blastp_uniprot_sprot sp|Q6K1C4|CAX3_ORYSJ 68 381 + 314 none 75.30 417 70.38 1e-148 Vacuolar cation/proton exchanger 3 OS Oryza sativa subsp. japonica GN CAX3 PE 2 SV 2
blastp_uniprot_sprot sp|Q5KQN0|CAX2_ORYSJ 38 381 + 344 Gaps:4 78.26 437 64.91 2e-144 Vacuolar cation/proton exchanger 2 OS Oryza sativa subsp. japonica GN CAX2 PE 2 SV 2
blastp_uniprot_sprot sp|Q6YXZ1|CAX4_ORYSJ 32 381 + 350 Gaps:26 76.06 447 60.88 7e-124 Putative vacuolar cation/proton exchanger 4 OS Oryza sativa subsp. japonica GN Os02g0138900 PE 3 SV 1
blastp_uniprot_sprot sp|Q945S5|CAX4_ARATH 40 379 + 340 Gaps:18 75.34 446 44.35 6e-79 Vacuolar cation/proton exchanger 4 OS Arabidopsis thaliana GN CAX4 PE 1 SV 2
blastp_uniprot_sprot sp|Q39253|CAX1_ARATH 75 379 + 305 Gaps:8 66.31 463 48.21 6e-77 Vacuolar cation/proton exchanger 1 OS Arabidopsis thaliana GN CAX1 PE 1 SV 3
blastp_uniprot_sprot sp|Q93Z81|CAX3_ARATH 35 379 + 345 Gaps:24 80.39 459 44.44 8e-75 Vacuolar cation/proton exchanger 3 OS Arabidopsis thaliana GN CAX3 PE 1 SV 1
blastp_uniprot_sprot sp|Q5TKG3|CAX1B_ORYSJ 96 379 + 284 Gaps:19 63.80 453 49.48 1e-73 Vacuolar cation/proton exchanger 1b OS Oryza sativa subsp. japonica GN CAX1b PE 2 SV 1
rpsblast_cdd gnl|CDD|129926 79 392 + 314 Gaps:10 83.84 365 48.69 6e-69 TIGR00846 caca2 calcium/proton exchanger. The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously having been identified in animals plants yeast archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This Hmm is generated from the calcium ion/proton exchangers of the CacA family.
rpsblast_cdd gnl|CDD|129474 95 377 + 283 Gaps:3 80.23 349 45.36 2e-58 TIGR00378 cax calcium/proton exchanger (cax).
rpsblast_cdd gnl|CDD|30736 73 397 + 325 Gaps:11 88.04 368 31.17 4e-49 COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|190072 116 397 + 282 Gaps:19 100.00 135 40.74 4e-13 pfam01699 Na_Ca_ex Sodium/calcium exchanger protein. This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells cardiac myocytes epithelial cells neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms NCX1 NCX2 and NCX3.
rpsblast_cdd gnl|CDD|30876 109 381 + 273 Gaps:32 77.19 320 24.70 3e-11 COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|211572 111 372 + 262 Gaps:31 77.85 307 26.36 5e-07 TIGR00367 TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This model models a family of bacterial and archaeal proteins that is homologous except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
rpsblast_kog gnl|CDD|36611 8 381 + 374 Gaps:18 83.90 441 51.62 2e-99 KOG1397 KOG1397 KOG1397 Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism].

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 162 172 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 116 262 147 PF01699 "Reactome:REACT_15518" Sodium/calcium exchanger protein IPR004837
Pfam 307 388 82 PF01699 "Reactome:REACT_15518" Sodium/calcium exchanger protein IPR004837
Phobius 212 231 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 128 138 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 318 328 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 299 317 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 232 242 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 329 354 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 173 197 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 79 79 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 107 127 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 198 211 14 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 139 161 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 243 262 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 374 395 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 263 298 36 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 101 106 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 396 397 2 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
TIGRFAM 93 381 289 TIGR00378 none cax: calcium/proton exchanger IPR004798
Phobius 355 373 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 80 100 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 74 377 304 PTHR31503 none none none

9 Localization

Analysis Start End Length
TMHMM 139 161 22
TMHMM 242 264 22
TMHMM 173 195 22
TMHMM 210 229 19
TMHMM 298 320 22
TMHMM 78 100 22
TMHMM 107 129 22
TMHMM 374 396 22
TMHMM 332 354 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting