Protein : Qrob_P0365510.2 Q. robur
Protein Identifier  ? Qrob_P0365510.2 Organism . Name  Quercus robur
Score  23.0 Score Type  egn
Protein Description  (M=2) 1.1.1.44 - Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating). Code Enzyme  EC:1.1.1.44
Gene Prediction Quality  validated Protein length 

Sequence

Length: 498  
Kegg Orthology  K00033
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0050661 NADP binding Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+.
GO:0006098 pentose-phosphate shunt The glucose-6-phosphate catabolic process in which, coupled to NADPH synthesis, glucose-6-P is oxidized with the formation of carbon dioxide (CO2) and ribulose 5-phosphate; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0901440 2 497 + 496 Gaps:3 99.60 495 87.42 0.0 6-phosphogluconate dehydrogenase putative (EC:1.1.1.44)
blastp_kegg lcl|rcu:RCOM_1690020 2 497 + 496 Gaps:3 99.60 495 87.22 0.0 6-phosphogluconate dehydrogenase putative (EC:1.1.1.44)
blastp_kegg lcl|cit:102626400 1 497 + 497 Gaps:3 100.00 494 86.84 0.0 6-phosphogluconate dehydrogenase decarboxylating 1 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10019859mg 1 488 + 488 Gaps:2 98.38 494 87.45 0.0 hypothetical protein
blastp_kegg lcl|vvi:100241717 1 496 + 496 Gaps:3 99.80 494 86.21 0.0 6-phosphogluconate dehydrogenase decarboxylating-like
blastp_kegg lcl|gmx:100803740 1 497 + 497 Gaps:4 100.00 495 86.87 0.0 6-phosphogluconate dehydrogenase decarboxylating 2 chloroplastic-like
blastp_kegg lcl|pop:POPTR_0001s10220g 1 497 + 497 Gaps:3 100.00 494 85.22 0.0 POPTRDRAFT_640402 6-phosphogluconate dehydrogenase family protein
blastp_kegg lcl|cam:101506872 1 497 + 497 Gaps:3 100.00 494 86.03 0.0 6-phosphogluconate dehydrogenase decarboxylating 1 chloroplastic-like
blastp_kegg lcl|csv:101229326 2 497 + 496 Gaps:3 99.60 495 86.00 0.0 6-phosphogluconate dehydrogenase decarboxylating-like
blastp_kegg lcl|pop:POPTR_0003s13540g 1 488 + 488 Gaps:2 98.78 492 85.80 0.0 POPTRDRAFT_799988 6-phosphogluconate dehydrogenase family protein
blastp_pdb 2w8z_B 5 483 + 479 Gaps:13 99.57 470 51.71 2e-167 mol:protein length:470 6-PHOSPHOGLUCONATE DEHYDROGENASE DECARBOXYLA
blastp_pdb 2w8z_A 5 483 + 479 Gaps:13 99.57 470 51.71 2e-167 mol:protein length:470 6-PHOSPHOGLUCONATE DEHYDROGENASE DECARBOXYLA
blastp_pdb 2w90_B 5 483 + 479 Gaps:13 99.36 471 51.71 2e-167 mol:protein length:471 6-PHOSPHOGLUCONATE DEHYDROGENASE DECARBOXYLA
blastp_pdb 2w90_A 5 483 + 479 Gaps:13 99.36 471 51.71 2e-167 mol:protein length:471 6-PHOSPHOGLUCONATE DEHYDROGENASE DECARBOXYLA
blastp_pdb 3fwn_B 8 481 + 474 Gaps:14 96.25 480 52.38 3e-160 mol:protein length:480 6-phosphogluconate dehydrogenase decarboxyla
blastp_pdb 3fwn_A 8 481 + 474 Gaps:14 96.25 480 52.38 3e-160 mol:protein length:480 6-phosphogluconate dehydrogenase decarboxyla
blastp_pdb 2zyd_B 8 481 + 474 Gaps:14 96.25 480 52.16 1e-158 mol:protein length:480 6-phosphogluconate dehydrogenase decarboxyla
blastp_pdb 2zyd_A 8 481 + 474 Gaps:14 96.25 480 52.16 1e-158 mol:protein length:480 6-phosphogluconate dehydrogenase decarboxyla
blastp_pdb 2zya_B 8 481 + 474 Gaps:14 96.25 480 52.16 1e-158 mol:protein length:480 6-phosphogluconate dehydrogenase decarboxyla
blastp_pdb 2zya_A 8 481 + 474 Gaps:14 96.25 480 52.16 1e-158 mol:protein length:480 6-phosphogluconate dehydrogenase decarboxyla
blastp_uniprot_sprot sp|Q9FFR3|6PGD2_ARATH 1 489 + 489 Gaps:2 100.00 487 85.22 0.0 6-phosphogluconate dehydrogenase decarboxylating 2 chloroplastic OS Arabidopsis thaliana GN At5g41670 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SH69|6PGD1_ARATH 1 488 + 488 Gaps:2 99.79 487 85.19 0.0 6-phosphogluconate dehydrogenase decarboxylating 1 chloroplastic OS Arabidopsis thaliana GN At1g64190 PE 2 SV 1
blastp_uniprot_sprot sp|Q94KU2|6PGD2_SPIOL 5 497 + 493 Gaps:2 91.43 537 83.71 0.0 6-phosphogluconate dehydrogenase decarboxylating 2 chloroplastic OS Spinacia oleracea GN pgdP PE 1 SV 1
blastp_uniprot_sprot sp|Q94KU1|6PGD1_SPIOL 1 487 + 487 Gaps:6 99.59 483 75.88 0.0 6-phosphogluconate dehydrogenase decarboxylating 1 OS Spinacia oleracea GN pgdC PE 1 SV 1
blastp_uniprot_sprot sp|Q2R480|6PGD2_ORYSJ 8 493 + 486 Gaps:10 95.67 508 75.51 0.0 6-phosphogluconate dehydrogenase decarboxylating 2 chloroplastic OS Oryza sativa subsp. japonica GN G6PGH2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FWA3|6GPD3_ARATH 7 489 + 483 Gaps:11 98.77 486 73.75 0.0 6-phosphogluconate dehydrogenase decarboxylating 3 OS Arabidopsis thaliana GN At3g02360 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LI00|6PGD1_ORYSJ 5 489 + 485 Gaps:13 99.58 480 74.27 0.0 6-phosphogluconate dehydrogenase decarboxylating 1 OS Oryza sativa subsp. japonica GN G6PGH1 PE 2 SV 1
blastp_uniprot_sprot sp|P21577|6PGD_SYNE7 5 481 + 477 Gaps:14 99.58 471 58.64 0.0 6-phosphogluconate dehydrogenase decarboxylating OS Synechococcus elongatus (strain PCC 7942) GN gnd PE 1 SV 4
blastp_uniprot_sprot sp|P52208|6PGD_SYNY3 9 481 + 473 Gaps:21 97.10 482 55.56 2e-175 6-phosphogluconate dehydrogenase decarboxylating OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN gnd PE 3 SV 1
blastp_uniprot_sprot sp|P80859|6PGD_BACSU 8 483 + 476 Gaps:11 99.15 469 52.90 6e-172 6-phosphogluconate dehydrogenase NADP(+)-dependent decarboxylating OS Bacillus subtilis (strain 168) GN gndA PE 1 SV 4

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 1 490 490 PIRSF000109 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" none IPR006113
Pfam 8 179 172 PF03446 none NAD binding domain of 6-phosphogluconate dehydrogenase IPR006115
SUPERFAMILY 8 181 174 SSF51735 none none none
TIGRFAM 9 482 474 TIGR00873 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" gnd: 6-phosphogluconate dehydrogenase (decarboxylating) IPR006113
Gene3D 7 184 178 G3DSA:3.40.50.720 none none IPR016040
PANTHER 9 495 487 PTHR11811:SF27 none none none
SUPERFAMILY 182 483 302 SSF48179 none none IPR008927
Gene3D 186 448 263 G3DSA:1.10.1040.10 none none IPR013328
PANTHER 9 495 487 PTHR11811 none none none
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 17 24 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PRINTS 72 101 30 PR00076 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" 6-phosphogluconate dehydrogenase signature IPR006183
PRINTS 7 30 24 PR00076 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" 6-phosphogluconate dehydrogenase signature IPR006183
PRINTS 125 150 26 PR00076 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" 6-phosphogluconate dehydrogenase signature IPR006183
PRINTS 255 282 28 PR00076 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" 6-phosphogluconate dehydrogenase signature IPR006183
PRINTS 173 201 29 PR00076 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" 6-phosphogluconate dehydrogenase signature IPR006183
PRINTS 371 393 23 PR00076 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" 6-phosphogluconate dehydrogenase signature IPR006183
Gene3D 450 483 34 G3DSA:1.20.5.320 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" none IPR012284
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 25 497 473 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 184 482 299 PF00393 "KEGG:00030+1.1.1.44","KEGG:00480+1.1.1.44","UniPathway:UPA00115" 6-phosphogluconate dehydrogenase, C-terminal domain IPR006114

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting